Gene Apar_0693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0693 
SymbolglyQ 
ID8413554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp769506 
End bp770420 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content49% 
IMG OID645022271 
Productglycyl-tRNA synthetase subunit alpha 
Protein accessionYP_003179713 
Protein GI257784496 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0752] Glycyl-tRNA synthetase, alpha subunit 
TIGRFAM ID[TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.11795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000246007 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCAA CACCACTAAC GTTTCAAGAT ATGATTTTGA CCCTTGAACA CTATTGGGCA 
GAAAAGGGCT GCACGATCAT GCAGCCATAC GACTCTGAGG TGGGTGCTGG TACCTTCCAC
ACCGCAACTA TTCTGCGCTC ACTTGGCCCC GATGCCTGGC GTACTTGCTA TCCACAACCT
TGTCGTCGTC CTGCTGATGG ACGCTATGGC GAGAACCCCA ACCGCTTGCA GCACTACTAT
CAGTTCCAGG TCTTGCTTAA GCCATCTCCT GCAGACTCCC AAGATCTCTA TCTTGGTTCA
CTTGCTGCTA TTGGCCTTGA TCCAAAAGAT CACGACGTTC GCTTTGTCGA GGACGACTGG
GAGAGCCCAA CTCTTGGTGC TTGGGGTCTT GGTTGGGAGG TTTGGCTCAA TGGTATGGAG
GTTACTCAGT TCACTTACTT CCAGCAGGTA GGCGGCATTG AGGTAGATCC AGTCCCTGTT
GAGATTACGT ATGGTCTTGA GCGCATTGCT ATGTATGCCC AGGGTGTTGA TTCTGTCTAT
GACCTGGTAT GGAGCTATCT TCCAGATGGT ACTCCAATGA CTTACGGTCA GGTATTCCTT
GAAAATGAGC GTGAGTTCTC AACCTATAAC TTTGAGGTAG CTAACATTGA CTTAATGCGC
GAGAAGTTCG ACGAGTATGA AGCAGAGTGT CATAGCTGCC TTGAGCGAAA ACTTCCACTT
CCTGCTTATG ACTGTGTCAT GAAGTGTAGC CACGCATTTA ACTTGCTTGA CTCTCGCGGT
GCTCTTTCTG CTGTTGAGCG AGCTAACTAT ATTCTTCGCG TTCGTACTGT TGCCAAAGCA
TGTTGCGAAT CGTATTTGGA GGAGGTTGCT TCTAAGAAAG CACCTGCGTC AACTACTCAG
GAGGAGGTGG CTTAA
 
Protein sequence
MSATPLTFQD MILTLEHYWA EKGCTIMQPY DSEVGAGTFH TATILRSLGP DAWRTCYPQP 
CRRPADGRYG ENPNRLQHYY QFQVLLKPSP ADSQDLYLGS LAAIGLDPKD HDVRFVEDDW
ESPTLGAWGL GWEVWLNGME VTQFTYFQQV GGIEVDPVPV EITYGLERIA MYAQGVDSVY
DLVWSYLPDG TPMTYGQVFL ENEREFSTYN FEVANIDLMR EKFDEYEAEC HSCLERKLPL
PAYDCVMKCS HAFNLLDSRG ALSAVERANY ILRVRTVAKA CCESYLEEVA SKKAPASTTQ
EEVA