| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0690 |
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| Symbol | |
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| ID | 8413551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 767716 |
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| End bp | 768174 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645022268 |
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| Product | 16S rRNA-processing protein |
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| Protein accession | YP_003179710 |
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| Protein GI | 257784493 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000088438 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000440701 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACGGTTC CCGTTCACAG CCTTCCTTCT CTTATAGCTG AAGGCATGAC AGTTGTTCCT
GTTCCACCTG CGCTCAAAGG CCCAAGGAAG TTCTCGGTTA TCTCTGTTGA GTCAGATGAT
AGAGAAGGTA GTCTTGTAAC CTTTGAAGAC GTAACTACCA TCTCTGATGC AGAAGAACTT
GTTGGTAAAA CGCTTCTGGT AGAAGAAGAT TGTCTTCCAG AAAACTTTGG TCTGGTAAAT
ACTTCTCTGC TTGTTGGTAG GGAAGTACGT GATAAAGAGC ATGGTTCTCT GGGTGAAATT
ACAGAAGTTC TTGTTGGACC TACACAAAAT GTGTGGGTAA TAGAAGGGTC TTATGGCCAA
ATTATGATGC CTGCTGTTGA TGAATTTATT CACGAGGCTC CAGTTGAAGG CTCTATTACT
GTTTCTATTC CTCAGGGACT TCTTAGGTTA GGTGAGTAG
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| Protein sequence | MTVPVHSLPS LIAEGMTVVP VPPALKGPRK FSVISVESDD REGSLVTFED VTTISDAEEL
VGKTLLVEED CLPENFGLVN TSLLVGREVR DKEHGSLGEI TEVLVGPTQN VWVIEGSYGQ
IMMPAVDEFI HEAPVEGSIT VSIPQGLLRL GE
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