Gene Apar_0689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0689 
Symbol 
ID8413550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp767348 
End bp767650 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content50% 
IMG OID645022267 
ProductRNA-binding protein (contains KH domain protein)-like protein 
Protein accessionYP_003179709 
Protein GI257784492 
COG category[R] General function prediction only 
COG ID[COG1837] Predicted RNA-binding protein (contains KH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000409438 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000420996 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCTGAAT TTACAGAGCC CACTGAGGTA GACGCTGTCG ATAAAGACAT TCAAGAGATG 
CCTTCTGATA AGGTTGCTGA CCTTGTTGAG TATATCGTTT GTGGTCTTGT CGATAATGAA
GATGCTGTCG CACTCGACGT CACCGATCGC GAGGATGGAG CCTTGATTGA GGTCTCTTGT
TCTGAGGAAG ACGCTGGGCG TGTCATCGGC CGCAAGGGTA GAACCATTAA GGCTATTCGT
ACTTTGGCTC GTGCTCTTGG CCAGCGTGTT GGTACCTCTG TTGATGTCGA GGTTGTAGGC
TAA
 
Protein sequence
MSEFTEPTEV DAVDKDIQEM PSDKVADLVE YIVCGLVDNE DAVALDVTDR EDGALIEVSC 
SEEDAGRVIG RKGRTIKAIR TLARALGQRV GTSVDVEVVG