Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0687 |
Symbol | |
ID | 8413548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | - |
Start bp | 765451 |
End bp | 766785 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 645022265 |
Product | DNA-directed DNA polymerase |
Protein accession | YP_003179707 |
Protein GI | 257784490 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000344848 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00527115 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGAATAT CAAAGAACAT ATCAGCTAAA ATCGCACGTA AATCATGTGA TTTTGAGTGG CATGGTAAAG CCATTGGTCT TCTTGACCTT GATGCATTCT TTGCGTCTGT GGAACAACTT GATCATCCTG AGTGGCGTGG AAAACCAGTA ATTGTAGGTG GTTCTCCTCA CAAACGAGGC GTTGTTTCAA CTGCATCTTA TGAGGCTAGA AAGTATGGTG TGCATTCTGC CATGGCTTCA GCTACTGCCG TCAAGCTTTG CCCACAAGCA ATTTGGACTC CTGGACGCTA TAACAGATAC TCTGAAATGA GCTCTCTTGT TATGGGATTT CTCAAAGACG AGACTCCCCT TGTTGAACAA GTTTCTATTG ATGAGGCATT TTTTGATATT ACTCCTGGAA GATTTTCTAA AGAAAACCCT TTGGAGATTT GTAAGCGGAT ACAAAAGAAA GTTGCGGCAC TAGGTATTAC TTGCTCCATT GGCCTGGGAA CAAACAAAAC AATTGCCAAA ATTGCCTCTG AGCAAGAAAA ACCTCGCGGC CTTACTGCAG TGTTCCCTGG TACAGAAAGC CATTTTCTAG CACCACTACC TATTGAGGCT ATGAGCGGCA TTGGCCCTGC TATGGCAAAA ACGCTTCATC AGCAAGGAAT CAGAACTCTT GGAGAGCTCT CAAGAGCAGA TAGTACCTAT CTAACTTCCT TTGTTGGCAA CACAGCTTCA AAGATGATTC TACGAGCGCA GGGAAAAGAA GTTTCGGAAG TTCATGAAGC AGCCCACCCT CGAGATGTTA AGTCTGTTTC TAACGAGAGA ACCTTTGAAA CGGACTTGTT TGATAAACAA GAAATAGAAG AGGCAATCAG ACACATCTCT GGTGTTGTAG GAAGACGTCT TCGTAAAAAA CAGTTACAAG GTTTTACCGT AACGCTTAAA GTGAAAGCAT CTGCAACAGA GTCACATACA GTTCAAAAAA GAATGTCCAT ACCAACTGAT GATGAGCACC TATTTGCAGA AATTGCTGTT AACCTTCTTC CAACAATTTG GAAGGAAGGT CAACCAGTAA GACTACTTGG CGTTGGTATT AGTTCTTTTA CTGACGAAGA CAATAGCAAG CCTGTTCAAA CGTCTCTTTT TGATCAATCT GAAGATACAT TTAACACTGG AGCATCTGTC CCAACAACAA AAAAGAAACC TCGGAGTGAC TTACGTCATC TTTCCGAGGT AACTGATAAA CTCAAAGATA AATTTGGTGC TAGTGTAGTG CAATATGGTA GAGATTTACG CTTTGAACAT CGCGTTTCAG ACACCATGCC TACAGGGAAA AACGAACAAA TATAG
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Protein sequence | MGISKNISAK IARKSCDFEW HGKAIGLLDL DAFFASVEQL DHPEWRGKPV IVGGSPHKRG VVSTASYEAR KYGVHSAMAS ATAVKLCPQA IWTPGRYNRY SEMSSLVMGF LKDETPLVEQ VSIDEAFFDI TPGRFSKENP LEICKRIQKK VAALGITCSI GLGTNKTIAK IASEQEKPRG LTAVFPGTES HFLAPLPIEA MSGIGPAMAK TLHQQGIRTL GELSRADSTY LTSFVGNTAS KMILRAQGKE VSEVHEAAHP RDVKSVSNER TFETDLFDKQ EIEEAIRHIS GVVGRRLRKK QLQGFTVTLK VKASATESHT VQKRMSIPTD DEHLFAEIAV NLLPTIWKEG QPVRLLGVGI SSFTDEDNSK PVQTSLFDQS EDTFNTGASV PTTKKKPRSD LRHLSEVTDK LKDKFGASVV QYGRDLRFEH RVSDTMPTGK NEQI
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