Gene Apar_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0687 
Symbol 
ID8413548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp765451 
End bp766785 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content42% 
IMG OID645022265 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003179707 
Protein GI257784490 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000344848 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00527115 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAATAT CAAAGAACAT ATCAGCTAAA ATCGCACGTA AATCATGTGA TTTTGAGTGG 
CATGGTAAAG CCATTGGTCT TCTTGACCTT GATGCATTCT TTGCGTCTGT GGAACAACTT
GATCATCCTG AGTGGCGTGG AAAACCAGTA ATTGTAGGTG GTTCTCCTCA CAAACGAGGC
GTTGTTTCAA CTGCATCTTA TGAGGCTAGA AAGTATGGTG TGCATTCTGC CATGGCTTCA
GCTACTGCCG TCAAGCTTTG CCCACAAGCA ATTTGGACTC CTGGACGCTA TAACAGATAC
TCTGAAATGA GCTCTCTTGT TATGGGATTT CTCAAAGACG AGACTCCCCT TGTTGAACAA
GTTTCTATTG ATGAGGCATT TTTTGATATT ACTCCTGGAA GATTTTCTAA AGAAAACCCT
TTGGAGATTT GTAAGCGGAT ACAAAAGAAA GTTGCGGCAC TAGGTATTAC TTGCTCCATT
GGCCTGGGAA CAAACAAAAC AATTGCCAAA ATTGCCTCTG AGCAAGAAAA ACCTCGCGGC
CTTACTGCAG TGTTCCCTGG TACAGAAAGC CATTTTCTAG CACCACTACC TATTGAGGCT
ATGAGCGGCA TTGGCCCTGC TATGGCAAAA ACGCTTCATC AGCAAGGAAT CAGAACTCTT
GGAGAGCTCT CAAGAGCAGA TAGTACCTAT CTAACTTCCT TTGTTGGCAA CACAGCTTCA
AAGATGATTC TACGAGCGCA GGGAAAAGAA GTTTCGGAAG TTCATGAAGC AGCCCACCCT
CGAGATGTTA AGTCTGTTTC TAACGAGAGA ACCTTTGAAA CGGACTTGTT TGATAAACAA
GAAATAGAAG AGGCAATCAG ACACATCTCT GGTGTTGTAG GAAGACGTCT TCGTAAAAAA
CAGTTACAAG GTTTTACCGT AACGCTTAAA GTGAAAGCAT CTGCAACAGA GTCACATACA
GTTCAAAAAA GAATGTCCAT ACCAACTGAT GATGAGCACC TATTTGCAGA AATTGCTGTT
AACCTTCTTC CAACAATTTG GAAGGAAGGT CAACCAGTAA GACTACTTGG CGTTGGTATT
AGTTCTTTTA CTGACGAAGA CAATAGCAAG CCTGTTCAAA CGTCTCTTTT TGATCAATCT
GAAGATACAT TTAACACTGG AGCATCTGTC CCAACAACAA AAAAGAAACC TCGGAGTGAC
TTACGTCATC TTTCCGAGGT AACTGATAAA CTCAAAGATA AATTTGGTGC TAGTGTAGTG
CAATATGGTA GAGATTTACG CTTTGAACAT CGCGTTTCAG ACACCATGCC TACAGGGAAA
AACGAACAAA TATAG
 
Protein sequence
MGISKNISAK IARKSCDFEW HGKAIGLLDL DAFFASVEQL DHPEWRGKPV IVGGSPHKRG 
VVSTASYEAR KYGVHSAMAS ATAVKLCPQA IWTPGRYNRY SEMSSLVMGF LKDETPLVEQ
VSIDEAFFDI TPGRFSKENP LEICKRIQKK VAALGITCSI GLGTNKTIAK IASEQEKPRG
LTAVFPGTES HFLAPLPIEA MSGIGPAMAK TLHQQGIRTL GELSRADSTY LTSFVGNTAS
KMILRAQGKE VSEVHEAAHP RDVKSVSNER TFETDLFDKQ EIEEAIRHIS GVVGRRLRKK
QLQGFTVTLK VKASATESHT VQKRMSIPTD DEHLFAEIAV NLLPTIWKEG QPVRLLGVGI
SSFTDEDNSK PVQTSLFDQS EDTFNTGASV PTTKKKPRSD LRHLSEVTDK LKDKFGASVV
QYGRDLRFEH RVSDTMPTGK NEQI