| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0684 |
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| Symbol | |
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| ID | 8413545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 763505 |
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| End bp | 764191 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022262 |
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| Product | nicotinate (nicotinamide) nucleotide adenylyltransferase |
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| Protein accession | YP_003179704 |
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| Protein GI | 257784487 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1057] Nicotinic acid mononucleotide adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000975396 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0246743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGTTG ACGTTTTAAA TAACATGCAT CCTGGTTTGC CTCGTTTGGG ACAGGACAAA
AACCGTACCT ATCGTTTGGG AATCATGGGC GGAACCTTTG ATCCCATTCA TAATGGCCAC
TTGGTAGCTG CTGAGCAGGC ATACGATGAC CTGCATCTTG ATGTGGTTGT CTTTATGCCT
GCTGGACGCC CTGCGTTTAA ACAAAATAAG GGAGTTACTA GGGGAGAAGA CCGTTACTCG
ATGACGCTTT TGGCAACCTC AGATAACCCT CATTTTGTAG CTTCTCGTTT TGAAGTGGAT
TATGAGGGCA TCACCTATAC CGCTGATACC TTAAGAAGAC TACGTAAGGT ATATCCTTCT
AACGTTGAGT TTTTCTTTAT TACTGGTGCA GATGCAATAG CCGATATCGT TACCTGGAAA
GACGCAAAGA GTGTATCAGA ACTTGCCCAC TTTGTTGCTG CAACACGCCC TGGTTATGAG
TTGAGTCGCG CTCAAAAGGT TATTACAGAC TCACCTTATG ATTTCAAGGT GACCTATCTT
GAGGTTCCAG CACTGGCAAT TTCATCAAGC TATTTGCGTA GTAGAGTTCA AAACGGTCAG
AGCCTCAGAT ATCTTACGCC TGATTCAGTA ACGGGCTACA TTCATAAGCA TGGTCTTTAC
GGTGCTGATT CAATACCGCT CAATTAA
|
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| Protein sequence | MAVDVLNNMH PGLPRLGQDK NRTYRLGIMG GTFDPIHNGH LVAAEQAYDD LHLDVVVFMP
AGRPAFKQNK GVTRGEDRYS MTLLATSDNP HFVASRFEVD YEGITYTADT LRRLRKVYPS
NVEFFFITGA DAIADIVTWK DAKSVSELAH FVAATRPGYE LSRAQKVITD SPYDFKVTYL
EVPALAISSS YLRSRVQNGQ SLRYLTPDSV TGYIHKHGLY GADSIPLN
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