| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0681 |
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| Symbol | |
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| ID | 8413542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 759316 |
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| End bp | 761241 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022259 |
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| Product | ABC transporter related |
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| Protein accession | YP_003179701 |
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| Protein GI | 257784484 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1122] ABC-type cobalt transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000207792 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.178275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTATTA TTGAAGTTCA ATCTGTGTCA TATAGCTATC CCGATAGTTC AGCGCATGCT
CTTAATGAGC TGTCTTTAAG CGTTCAAGAG GGTGACTTTG TAGGTATTGT TGGTCCTTCC
GGTGCAGGTA AGTCTACACT TGCTCTTGCG CTTTCTGGTG CCATCCCTCA CCATTTCAGG
GGCAATTTTT TTGGAAAGAT TCTTGTTTCT GGAATGGATA CCTGCACGGT TGCGTTAACT
GATATCTCTA AGATTGTGGG ATCAATCACT CAAGATATCA ATGCACAGAT GGTCGCTTCA
ATTGTTGAGG ATGAGCTTCT CTTTGGTCTT GAGAACTTTG CCGTTCCTCA TGCAGAGATT
CCAGAGAGAA TTACGTATGC CCTAGAAACT GTTGGTATTG CCAACCTTCG CTTTAGAGAG
ATTGCTTCTC TTTCTGGCGG ACAGAAGCAA AAAGTTGCTA TTGCAGCTCT TCTAGCATTA
CAACCACAGG TTATGGTGCT TGATGAGCCA ACAGCAGCCT TAGATCCAAC GTCGTCTGAG
TTAATCTTCC AGACGCTTTC AGAGCTCAAT AAAACTAAAG ACATTACCGT TGTGGTGATT
GAACAGAAAG TTGGTCTTCT CGCCAAGTAT TGTTCAAAGA TTGCCATTAT GGACAAGGGT
ACTATTTGTG CATTTGGTAG TGGTGAGGAA GTATTCTCAC AGGTAGATTT GTTACAAGAG
GTTGGTGTTG ATGTCCCTCG TTGTGTACGC GTTTCAAAGG GCGTCCATGA GCTTTCACAG
CAGCCTGAGT ATGCTCACTT GATTAGTGAG GCTGACAGAG CCGTCTGCGA TGAGACTGCG
TTATCGGTTC AGTCAGCTGC TAAACAGCTT GCACATTGTG TGGGCGCTCT TCAGCATCGT
AGTATTTCTC TTACAGAGAG CTTTGAAACA TCCGCTACTG ATGCTGTTGA GCTGGCAGGA
AAAACATATC TTCCAAAAAT TGATGGTCCT GTAGTTGCTG AATCTAGTGG GCCATTTGAA
AGGATTGGTG TTCTTCAAGA CGCGGAGCCG CCAAGTACTC AGTCCGTTCT GGATGTTATT
GATGCCACCT TTAAATACCA GGAAAGTACT GATGGTGTTG AGCGTGTCTC TCTTAGTTTG
TATCCTGGCG AGCTTGTTGC CCTTGTAGGT CAAAATGGTG CTGGTAAGAC AACTCTAACT
AAGCTGGTAA ATGGTCTCTT ACGTCCACGA TCTGGAGACA TTCAAATTAA AGGCGCTTCA
TGCAAGGGTT GGAAAACATC GCAGATTGCT CAGCATGTTT CAACGCTGTT CCAAAATCCT
GATTACCAGA TTTGTAAAGA GAGTGTTCTT GAGGAGGTTG CTTTTGGCCC TGAGCTCAAA
GGCGCGTCTA CAGAAGAAGC TCGCAAGAAA GCACTTGAAG TAATTAATCA TATGGGATTG
GATGCAGATG CGTCACCGTT CATGCTTTCT CGTGGACAGC GTCAGATGGT CGCCCTGGCT
TCCGTGGTTG CTTGTGAGCC AGATATTCTT GTGCTTGATG AACCAACGTC AGGTCTGGAT
TACAAAGAGT GCATGCAGGT CATGAACATG GTTCAGTCTC TGTGCGAGAA GGGCTGTGCA
GTTCTTATGG TTTGCCATGA TATGGAGGTT GTGCTGGATT TTGCCAGCAG AATTGTCGTC
ATGGCGCATG GCAGCGTATT AGATGATGGG GAAGTCACAC AGATCTTCTC GACAGATGAG
GTTCTAAAAG AAGCATATGT TGAGGCTCCT CAGATAATCC AACTGTCAAA GCTAGTAGGT
ACGCATGTGG ACCCGTCATT TGCTGGGCTA AGCAGTGCTT CAGAGGTGCT TGATGCATTG
CGGTATCAGT TTGAAACTTC TCGAATTGCA GCAACGCTGA ATGGTAAGGA GGTTTCTCGT
GGGTAG
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| Protein sequence | MSIIEVQSVS YSYPDSSAHA LNELSLSVQE GDFVGIVGPS GAGKSTLALA LSGAIPHHFR
GNFFGKILVS GMDTCTVALT DISKIVGSIT QDINAQMVAS IVEDELLFGL ENFAVPHAEI
PERITYALET VGIANLRFRE IASLSGGQKQ KVAIAALLAL QPQVMVLDEP TAALDPTSSE
LIFQTLSELN KTKDITVVVI EQKVGLLAKY CSKIAIMDKG TICAFGSGEE VFSQVDLLQE
VGVDVPRCVR VSKGVHELSQ QPEYAHLISE ADRAVCDETA LSVQSAAKQL AHCVGALQHR
SISLTESFET SATDAVELAG KTYLPKIDGP VVAESSGPFE RIGVLQDAEP PSTQSVLDVI
DATFKYQEST DGVERVSLSL YPGELVALVG QNGAGKTTLT KLVNGLLRPR SGDIQIKGAS
CKGWKTSQIA QHVSTLFQNP DYQICKESVL EEVAFGPELK GASTEEARKK ALEVINHMGL
DADASPFMLS RGQRQMVALA SVVACEPDIL VLDEPTSGLD YKECMQVMNM VQSLCEKGCA
VLMVCHDMEV VLDFASRIVV MAHGSVLDDG EVTQIFSTDE VLKEAYVEAP QIIQLSKLVG
THVDPSFAGL SSASEVLDAL RYQFETSRIA ATLNGKEVSR G
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