Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0673 |
Symbol | |
ID | 8413534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 750531 |
End bp | 752540 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 645022251 |
Product | penicillin-binding protein 2 |
Protein accession | YP_003179693 |
Protein GI | 257784476 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.810569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTCA CCCTTGTTAT CCTTGCTTGT TGCGCTGTTG CAGCAATTGG TCTGATTATC GTATACCTTA TTTTTGGTAG AAAAGATTCG CCATTTACCT TTGATATTGG CGGTGGAGTT CCTAAGGCTT CCGGCGGCTC TGATGGTTCT GCCGAGAAAA CCCTCTCGTC CAGACTTATT GGATTTGCGA TTGCTGTTGG TGGTATGTTT GCTGTGCTCA TTGGTCGTCT CTGGACCATG CAGCTCTTAT CGTCAGCTGA CTATACCGAG CAAGCAGAGC GCAACCGAAC ACGCACTGTT ACCACTGCAG CCCCTCGTGG CCGTATTTTG GACAGAAACG GTGTGGAGAT TGTTACTAAC AGACCAAGTC CAACGGTGGT AGCACGAGCA GACGTTGCAG AAGATTACGT TAAGCTACAG ATTCTTGCTA ACCTTTTGGG CATGCCTATG TTGGCTGTGC GCAGAAAGAT TTTGGACACT TCCGATGGCG CTCAGGCACT ACGCACGGTT TCTGTAGACG TATCTAGGCG TGTGGTTGCC TATATTTACG CTCATGGCGC TTTGCTCGAT GGCGTTTCAA TTGAGGAACG CACGCAGCGT GCATACCCAA ACGGTTCTCT TGCAGCTCAT GTTGTTGGCT ATACCGGTAC CGTTACTCAA GAGCAGCTTG AAAGCAGTAA AACTGCAGAC GGTGGCTTTG TGTACGCTCA TGGCGATATC GTGGGCCAAA CGGGTGTTGA GTATCAGTAT GAGTCCGCTC TTCAGGGTGT TCGCGGTGAG CAGACGGTAT ACGTTGACGC TGCTGGTAAC GTTTTGTCTC ACTCAACGTC AATTGCTCCT CAGGGCGGCT CAGACGTTGT ATTGACCATT GATGCTAACA TTCAAAAAGC CGCAGAAGCA TCGCTTGTAA GTGTTATTAA CACCGTTAGA TCTCAAGATT ACCAGGGTCG TAGTGCAAGC GTGGTGGCAC TTGATTGTAC TAATGGTGAA GTCATTGCTA TGGCAAGCTA TCCAACCTTT TCTCCTTCAA TGTTTGTTGG AGGTATTTCC AGCTCTGACT GGGATACGCT TTCTTCTGAA GAGGCAAACT ATCCTTTGAT GAATCGCGCC ATTGCTGGCA TGTATCCATC GGGCTCCACC ATTAAGGCTC TGACTACTTT TGCTGGACTT AAGTACGGCA TTTGTGACGG AAATTCTAGC TGGTATTGCA CAGGTTTTTG GACTGGATTT GGCGAGCAGT ACGGTATGCA CTGCTGGCTT CTTTCTGGAC ACGGTACCGT TAATTTAATT ACTGGTATTA CCAATTCTTG CGATATTGTA TTTTATGAGA TTGGTAAGGG CTTCTTCTAT AACAATGATC ATCCAGAGGG TATGCAAGAG ACATTTCGTG CCTTTGGACT TGGTTCCCTT TCTGGTATTG ACCTTCCAGA AGAAGCGTCT GGCCGCGTTC CTGACGCGGA ATGGAAGTGG AATTACTTTA CTAGTTCACC TGATGATGCT CGTAAGTGGC AAGGTGGCGA TAACTGTAAC CTTGCTATTG GTCAGGGCGA TCTTTTAGTA ACCTGTCTTC AGATGGCAAA TGCGTACTGT GGTATTGCAA ACCGCGGTCC TATTTACAAG CCACATGTGT TGAAGAGCAT TAACGCCAGA AACGGTAACG GCTCAGTTAT TGAGTACAAA AACGAGGTCA TTCTGACGCC GGAAGAAAAA GATGAGCATA GAGACATTGT TGCTCGAGGT CTTTATGGTG TTGTCTACGA GGAGTCCACT ACTCAGACTA TCCATTGGAC CAATCTGGAT GTTACCGTTT GTGGCAAGAC GGGCACTGCT GAGCAGCAGT CTGTTGGTGA GCCAGTTGGT TGGTTCGTTG GCTATGCGCC AGCTGATAAG CCTCAGTACG TTGTTGCCGC AAACCTTGAT TGCGCTCCTT CTGGCGCAGG TTCTGGTATG TATATTGTTC GAGACGTCTT TGGAGCAATT TATAATCAGC CAGACAATGT TGGTAGGTAA
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Protein sequence | MNFTLVILAC CAVAAIGLII VYLIFGRKDS PFTFDIGGGV PKASGGSDGS AEKTLSSRLI GFAIAVGGMF AVLIGRLWTM QLLSSADYTE QAERNRTRTV TTAAPRGRIL DRNGVEIVTN RPSPTVVARA DVAEDYVKLQ ILANLLGMPM LAVRRKILDT SDGAQALRTV SVDVSRRVVA YIYAHGALLD GVSIEERTQR AYPNGSLAAH VVGYTGTVTQ EQLESSKTAD GGFVYAHGDI VGQTGVEYQY ESALQGVRGE QTVYVDAAGN VLSHSTSIAP QGGSDVVLTI DANIQKAAEA SLVSVINTVR SQDYQGRSAS VVALDCTNGE VIAMASYPTF SPSMFVGGIS SSDWDTLSSE EANYPLMNRA IAGMYPSGST IKALTTFAGL KYGICDGNSS WYCTGFWTGF GEQYGMHCWL LSGHGTVNLI TGITNSCDIV FYEIGKGFFY NNDHPEGMQE TFRAFGLGSL SGIDLPEEAS GRVPDAEWKW NYFTSSPDDA RKWQGGDNCN LAIGQGDLLV TCLQMANAYC GIANRGPIYK PHVLKSINAR NGNGSVIEYK NEVILTPEEK DEHRDIVARG LYGVVYEEST TQTIHWTNLD VTVCGKTGTA EQQSVGEPVG WFVGYAPADK PQYVVAANLD CAPSGAGSGM YIVRDVFGAI YNQPDNVGR
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