| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0666 |
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| Symbol | |
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| ID | 8413527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 742054 |
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| End bp | 744498 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022244 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_003179686 |
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| Protein GI | 257784469 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTGC AAGGTACTGA GGGTAAGATA GGCGCGCGTT CTGATGAAGC GTACGTAGGT
CTGACATCAA AAGAAGTTGC TGAAAGAGTT TCTGCAGGTA AAGTCAATAC TAATACAGAC
GTAAAAACCA AATCTATTGC TCAGATTATT GCGGAGCATA GTTTTACGCT CTTCAATATA
GTTAATGTTT TGATGGCTCT GCTTGTTGTT GTTACAGGAC AGTACAGAAA TGCACTGTTC
ATGAGCGTAG TCCTTGCAAA TCTGGTCATT GGCATTGTGC AAGAGATTCG CGCAAAACGC
ATGATTGACC GACTGTCTCT TATGACAGCT CAGAGTGTTT GTGTAATTCG TGACGGAAAA
GACGCGTTTA TTAAACCAGA TGAGCTTGTT GTTGATGATT TTGTCCGCTT AAAAACGGGT
GATCAAATTC CTGCCGACAG TATTCTTGTG TCAGAGCACG TAAGCGTTGA TGAAAGTTTA
CTTACCGGCG AGGCAGAGCC AGTACAAAAG ATTACAGGAG ACGAGCTTCT TTCTGGCAGT
TTTGTCGAGA GAGGCAGTCT TGTTTGTAAA GTTTACCGTG TAGGTCAAGA AGGCTATGCG
GCGCGTATTA ACGCAGAAGC AAAATTTGTT AAAGAAATTA ACTCAGAGAT TCTTTCTACA
ATTAAGTCAA TTATCCGTGC GGGTTCCATT GCGCTGATTC CGTTGGGAAT TGGTCTTTTT
GTCCGCACAT ATTTCATTGG GCACGCTGAT TTAAACGAAG CGCTTCTTTC TATGATTGCT
GCTGTTATTG GCATGATTCC ACAAGGACTC GTCCTTCTCA CCAGCTCGGT ACTTGCTATT
GCAACTATTA GGCTCGGTCA GAAAAACGTT CTGGTTCAGC AGCAATACTG TATTGAGACG
TTGGCGCGTG TAGATACTCT CTGCTTGGAC AAGACGGGCA CTATTACCAC GGGAAACATG
GAGGTTGCAC GAGTCCTGGA TGCTTCATTT AAGCCAATCA CTGAGGCTTC GGGTGCTCTG
CAAGCGGCTG TGAACGTTGT CGGCGCAAAC AAAGATGACG CCAACGATAC GGCTGCAGCA
ATCCTTGCAT ATGCATCTAA GCAGGGGATT CAAAGCAAAC ACTCTTCTCG CGTTGTGGCG
TTTTCTTCCA AGAGAAAGTA CTCTGGTTGC GTTACTGAGG ACGGGCAGGC GTTTGTTATT
GGCGCCGCAC AGTTTGTGCT TGGTCCCGAA GCAGCAGATG TTATAGCGGC GTCCGATGCC
TTTGCGTCTA TTGAACGCGT GCTGGTTGCT TGTAGTGTTG ACTCATTTGA TCAGAACGAT
GCGCTACAAG GAACTCCTCA GCTTTTGGGT TATGTGGTGC TCAGAGATCA GATTAGAGAG
ACCGCTCCAC AGACCATTAC ATACTTCCTT GAGCAAGGTG TTGACCTGCG CGTTATTTCG
GGCGATGATC CTCGTACCGT CTCAGCTATT GCTAAACGTG CGGGAGTTCC ACATGCCGAT
GGTTGGGTAG ACGCAACTAC ATTACACACA GAGGCAGATA TTGCAGCTGC TGTAGAGAAG
TACCACGTGT TTGGACGCGT TACACCAGAA CAGAAGCGTG AGCTTGTTAT TGCGCTTCAG
AATCTTGGTC ACACAGTTGC CATGACCGGT GACGGCGTGA ATGACATCTT AGCCCTCAGA
CAATCAGATT GCTCTATTTC TGTTGCCTCT GGTTCCGCTG CAGCTAGAAA CGTTGCAGAG
ATTGTCCTGG CAGACAACGA TTTTGCTCAC ATGCCAGAAG TTGTTGCTGA GGGAAGGCGC
TCTATTAATA ACCTTCAGCG ATCCGCTGCA CTTATTCTTG TGAAGACGGT TTATACTGCA
GCTCTGGCGC TGTATTGCAT CATTGCACCG CCGTATCCCT TTATTCCAGT TCAGATGTCG
CTACTTTCGT TTGCCACTGT TGGACTGCCA TCATTTGTGT TGGCACTTGA GCCTAATCAC
GACCGTGTAA AGGGTAACTT TTTGATCAAT ATTTTGCGCA AGTCGCTTCC AGCTTCTATT
GCTGTGACCA TTACCCTTGC GTTTCTTATG ACTGCGGGTC ATCTGTTTAA TTTGAATCTT
TCTCAGGTGT CTACGATGGC GCTTATCACC ACCGCAACAG TTGGTTTTGC ACTGCTCAGA
AGAATTTCTT TGCCACTTAC TAAGCTTCGC GTTGTACTTC TTCTTGTGTG CATTGCTATT
GTTGTCGGCG GATGCACTGT GGCGCAAGAC TTCTTCCGTA TTGCGCCTCT AACCGCACAC
ATCTTGCCGT ACTTGGCAAT TTGTTTGGTG GTTTCCGTTA TCATTTTCAA TAGAATTTCC
GAACGTTACA TCCATAACTA TAAAAAGGAC AGATTCTTTG ATTTGGTTGT GAGATTAATG
GGAGGAAAGT CAACTTATAG CTCTTCTGCT GATATAAACG ATTAA
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| Protein sequence | MSLQGTEGKI GARSDEAYVG LTSKEVAERV SAGKVNTNTD VKTKSIAQII AEHSFTLFNI
VNVLMALLVV VTGQYRNALF MSVVLANLVI GIVQEIRAKR MIDRLSLMTA QSVCVIRDGK
DAFIKPDELV VDDFVRLKTG DQIPADSILV SEHVSVDESL LTGEAEPVQK ITGDELLSGS
FVERGSLVCK VYRVGQEGYA ARINAEAKFV KEINSEILST IKSIIRAGSI ALIPLGIGLF
VRTYFIGHAD LNEALLSMIA AVIGMIPQGL VLLTSSVLAI ATIRLGQKNV LVQQQYCIET
LARVDTLCLD KTGTITTGNM EVARVLDASF KPITEASGAL QAAVNVVGAN KDDANDTAAA
ILAYASKQGI QSKHSSRVVA FSSKRKYSGC VTEDGQAFVI GAAQFVLGPE AADVIAASDA
FASIERVLVA CSVDSFDQND ALQGTPQLLG YVVLRDQIRE TAPQTITYFL EQGVDLRVIS
GDDPRTVSAI AKRAGVPHAD GWVDATTLHT EADIAAAVEK YHVFGRVTPE QKRELVIALQ
NLGHTVAMTG DGVNDILALR QSDCSISVAS GSAAARNVAE IVLADNDFAH MPEVVAEGRR
SINNLQRSAA LILVKTVYTA ALALYCIIAP PYPFIPVQMS LLSFATVGLP SFVLALEPNH
DRVKGNFLIN ILRKSLPASI AVTITLAFLM TAGHLFNLNL SQVSTMALIT TATVGFALLR
RISLPLTKLR VVLLLVCIAI VVGGCTVAQD FFRIAPLTAH ILPYLAICLV VSVIIFNRIS
ERYIHNYKKD RFFDLVVRLM GGKSTYSSSA DIND
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