| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0654 |
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| Symbol | |
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| ID | 8413514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 730651 |
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| End bp | 731433 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022231 |
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| Product | pyruvate formate-lyase activating enzyme |
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| Protein accession | YP_003179674 |
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| Protein GI | 257784457 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
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| TIGRFAM ID | [TIGR02493] pyruvate formate-lyase 1-activating enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00347583 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCTCA ATGACCCGCT CACAGTTTGT GGGCGGGTTC ACTCTATTGA GACCTTTGGC
ACCGTAGATG GCCCTGGAAC TCGCCTGGTT GTATTTACCC AGGGGTGTCC AATGCGTTGT
GCCTATTGTC ATAATCCAGA TACATGGCAA TTTGGTATTG GAACAGAAAC ATCGGTAAAA
GAAATTCTTG CCACCTTTAA CCGCAATAGA GCTTTTTATA GAAACGGTGG AATTACGGCT
ACTGGTGGCG AACCACTTGC TCAACCAGAG TTTGTTGGAG CTCTTTTTGA AGCAGCTCAT
AACGACCCAC GTGGACGTAT TCATACCTGT CTTGACTCTT CTGGCATTGC ATACAATCCA
GAAACTCCAG AGAAATTTGA GCGCATTCTT GATAACACGG ATTTGGTGCT CCTTGATATC
AAGCACTCTG ATCCAAAGGG ACACATAAAT CTCTGTGAAG TTGGTTCAGA AAGACCACTT
GCATTTGGCG ATGAGCTCAA CCGTAGGGGT ATTAAAGTTC TTATCAGACA TGTTGTAGTA
CCAGGTATCA CTGATTCAGC AGAAGAACTT GCTGGTGTTG GTAGGATTAT TGCTCACTGG
GATAATGTTA TTGGATTAGA TGTTCTTCCT TACCACGTAA TGGGCGTAAA AAAGTATGAA
GAGATTGGCA TTCCTTACAA GCTTTCTGAT ACTCCTGCTA TGGATGCAAA AAAGATTCCA
GAGCTGCGCA AACAAATCCT TATTGCTCGC ACCCTTGAAC GCAAAAAGCT TGGAATGCGG
TAA
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| Protein sequence | MDLNDPLTVC GRVHSIETFG TVDGPGTRLV VFTQGCPMRC AYCHNPDTWQ FGIGTETSVK
EILATFNRNR AFYRNGGITA TGGEPLAQPE FVGALFEAAH NDPRGRIHTC LDSSGIAYNP
ETPEKFERIL DNTDLVLLDI KHSDPKGHIN LCEVGSERPL AFGDELNRRG IKVLIRHVVV
PGITDSAEEL AGVGRIIAHW DNVIGLDVLP YHVMGVKKYE EIGIPYKLSD TPAMDAKKIP
ELRKQILIAR TLERKKLGMR
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