| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0653 |
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| Symbol | |
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| ID | 8413513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 729560 |
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| End bp | 730609 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022230 |
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| Product | tryptophanyl-tRNA synthetase |
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| Protein accession | YP_003179673 |
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| Protein GI | 257784456 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00257706 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAACG AAGGCAGTTA TGAAGCAGCT GTACGCCGTT CTGATGAAAT CCAGGCGGAT
TTAGCTGAGC ATGCAGGAAA GTACAACATG CTTACTGGTG ACCGTCCTAC TGGAAGACTT
CACCTTGGCC ATTACTTTGG CACTATTGTT GAGCGCGTAA GACTCCAAAA TCTTGGTGTT
CATACCAATA TTATTATTGC TGACTATCAG GTTATTACAG ACAGAGACAC TACTGAGCAT
ATTGCAGACA ATGTCTACAA TATGGTTATT GATTATCTGG CCTGCGGAAT TGATCCAGAA
AAGACCATGA TTTTCACACA TTCTGCAGTT CCAGCTCTTA ATCAGCTTAT GCTTCCGTTC
CTCTCGCTTG TTAGTGAGTC TGAACTGCAT AGAAATCCAA CCGTTAAGGC AGAGCAAGAG
GCATCTGGAC ATGCTCTCAC AGGTCTTCTC CTAACCTATC CTGTTCACCA GGCATGCGAC
ATTCTCTTCT GTAAAGGAAA TGTTGTTCCT GTTGGTCGCG ATCAGCTGCC TCACATTGAG
ATTACTTCTA AAATTGCTCG TCGCTTTAAT GAGCGCTACG GAAAGGTATT CCCAGAGGTT
TCTGGCCTTC TCACCTCCAC CCCACTTATT CCTGGTCTTG ATGGTCGCAA GATGAGCAAG
TCTTACGGAA ATGCTATCTC GCTTTCTATG ACAGCTGAGG AAACTGCCAA GCTTATCAAG
AAGTCAAAGA CTGACTCCGA GCGCATGATT ACCTTTGACC CAGAGAACCG TCCTGGCGTC
TCAGCGCTGC TCACCACTGC TGGCATTTGT ACTGGCCGTG ATCCAAAAGA AATTGCTGAC
GAGATTGGCA TGGGTGGTGG CGGAGCACTC AAGGCTTACG TCATTGATGC TGTTAACTCC
TACTTTGAGC CAATTCGTCA GAGGCGCGCA GAGTTTGCAG CTCAGCCAGA TCTTATTCGC
GATATCCTCC ACGACGGAAA TGCTCGTGCA AACGTTATTG CTAATGCAAC GCTTGACGAG
GTTCGTGAAG CAATGGGAAT GGTCTACTAA
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| Protein sequence | MPNEGSYEAA VRRSDEIQAD LAEHAGKYNM LTGDRPTGRL HLGHYFGTIV ERVRLQNLGV
HTNIIIADYQ VITDRDTTEH IADNVYNMVI DYLACGIDPE KTMIFTHSAV PALNQLMLPF
LSLVSESELH RNPTVKAEQE ASGHALTGLL LTYPVHQACD ILFCKGNVVP VGRDQLPHIE
ITSKIARRFN ERYGKVFPEV SGLLTSTPLI PGLDGRKMSK SYGNAISLSM TAEETAKLIK
KSKTDSERMI TFDPENRPGV SALLTTAGIC TGRDPKEIAD EIGMGGGGAL KAYVIDAVNS
YFEPIRQRRA EFAAQPDLIR DILHDGNARA NVIANATLDE VREAMGMVY
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