Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0641 |
Symbol | |
ID | 8413501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 718900 |
End bp | 720249 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 645022219 |
Product | exodeoxyribonuclease VII, large subunit |
Protein accession | YP_003179662 |
Protein GI | 257784445 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1570] Exonuclease VII, large subunit |
TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.782635 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAGA TTCAAGAGAA AGAAGATTCT GTTCTTTCAG TATCTGATGC AGTGCTTTTT GCAAAAAATG AAGTTGCCTC AATGCCGTCT ATGACGGTAG TTGGAGAGGT TTCTGGATTT AGAGGTCCAA ACTACAAATC TGGTCATTGC TATTTTGACG TAAAAGACCC AGTTAGCTCT ATGTCGGTTA TTGTTTGGTC AAAGATTTAT GCTGCTAGTG GTATTACGTT GCAAGACGGC ATGAAGATTC AGATGAAGGG AAAGTTTGAT ATTTACGCTT CAAGCGGCAA GCTTTCTTTT CATGCTCGCA CTATCCAGAT TGCTGGAGAA GGAGACCTCC GTCAGAAGGT GGCACAGCTT GCTAAAAAGC TAGAAAAAGA AGGTCTTACT GATATTTCTA GAAAGCGCTC TATTCCAGAG TTTTGTACGC GCATTGGTGT GGTTACGTCA CTTTCTGGTA GCGTAATTGA TGACGTTAAA CGTACGCTTG CACGTAGAAA CCCCCTTGTA GAGCTTGAGG TTTCCGGATG TGCTGTTCAG GGCACTCATG CGCCCGCAAC TATCATCAGA GCGCTTCAGG TGGCTGCAAC CACGCGTCCA GACGCAATCT TGCTGGTACG TGGTGGTGGC TCATTTGAAG ACCTTATGTG TTTCAATGAT GAGGGAGTAG CGCGTGCTAT TGCTGCATGC CCTATTCCTG TTATTACAGG TATTGGACAT GAGCCAGATA CTACAATTGC AGATATGGTT TCTGATAGAA GAACTTCAAC GCCAACGGCT GCTGCAGAGT CTGTGGCTCC CGCAATTAGC GAGTTACAGA CTACGTTTAA TAACAGAATT TCTCGCCTTG GAAACGCTAC AAGAAAGATT TTGCAGTTCT ATAAAACGGG TCTTATTACT GTTGAACAGC GTTCTAACTT GGCAATGAAG AATGTTTTAT CAAGTAAAAA ATATCAGCTA GATAAGTTGT CTGATCGTCC TTGTTTGAAG GATCCTATTT ATATTATTTC TACAAGAACA GAAGATCTCA ATCAGACTGA GCAAAGGTTA ATGGATGCTT TTCCTGCACT TCTTTCAAGA AAAAAAGAGA TGCTTTTTGT TGAGTCACAA AGACTTACCA GAGCTAGTGC CGCCATGTTT CATCCACATC AGGCTTTGCT GTCTTCGCTT GCAGGAAGGC TAGATGCACT TTCTCCTTTA AAAGTTCTTA CAAGGGGATA TGCATACGTT CAAGATGAAA GAGGATCTGT TATTAAAACG GCCAAAGAGG CCTCTGTTGG AGATTCCTTG CTGGTCAAAA TGAGGGATGG AACAATTAAG GCAACTGTTT CTGACATTGA ACTTTCATAA
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Protein sequence | MNQIQEKEDS VLSVSDAVLF AKNEVASMPS MTVVGEVSGF RGPNYKSGHC YFDVKDPVSS MSVIVWSKIY AASGITLQDG MKIQMKGKFD IYASSGKLSF HARTIQIAGE GDLRQKVAQL AKKLEKEGLT DISRKRSIPE FCTRIGVVTS LSGSVIDDVK RTLARRNPLV ELEVSGCAVQ GTHAPATIIR ALQVAATTRP DAILLVRGGG SFEDLMCFND EGVARAIAAC PIPVITGIGH EPDTTIADMV SDRRTSTPTA AAESVAPAIS ELQTTFNNRI SRLGNATRKI LQFYKTGLIT VEQRSNLAMK NVLSSKKYQL DKLSDRPCLK DPIYIISTRT EDLNQTEQRL MDAFPALLSR KKEMLFVESQ RLTRASAAMF HPHQALLSSL AGRLDALSPL KVLTRGYAYV QDERGSVIKT AKEASVGDSL LVKMRDGTIK ATVSDIELS
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