| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0640 |
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| Symbol | |
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| ID | 8413500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 718211 |
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| End bp | 718897 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022218 |
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| Product | peptidase membrane zinc metallopeptidase putative |
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| Protein accession | YP_003179661 |
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| Protein GI | 257784444 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2738] Predicted Zn-dependent protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.575785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTACT CTGGTGCATT TATCCCATAC ATTGTTTTAG TGGTTGTCTC TTTGGTACTC
GGATTAGGTA CTCAGTGGTA CATCAAGCAT GAATTTAAAA AGTATTCTTT AGTTCCTTCA
GGGTTTAATG CTAGTGGCGC TTCTGTTGCT CGCGCCATGA TGGATGCTAA TGGAGCAGCT
AACGTTGGCA TTAAGAGAAT TTCTGGCGAA CTCACAGATA ACTTTGATCC ACGTGATAAT
TGCCTACATC TTTCTGATGC AAACTTCTCG GAGGGTAGCG TAGCTTCGCT TGCTGTCTCT
TGCCATGAGG CAGGTCATGC TGTTCAGACA GCTAAGATGT TTATGCCAGC ACGCGTCCGT
TCTGCTCTTG TTCCTGTTGT TAATTTTGCG GCTGCATCGT GGATTTATGT CTTTATCGCT
GGTATTTGGC TAAATATTTC AGGTATGACC ATGCTAGCAA TATGGCTGTA CGCATTTACC
TTCCTGTTCC ATGTAGTTAC ACTTCCAGTA GAGATTGATG CCTCAAGGCG TGGATTAGCT
TTTTTGAAGG CAAACGCCCC TGCGGGTTTT GATTACGCTG GTGCTAGAAA GGTGCTTATC
GCTGCTGCCC TTACTTACGT AGCTGCTGCA ATGGTTTCTG CGCTTCAACT TTTGTATTTA
CTTGGTTCTT CTAGAAACAG GAACTAG
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| Protein sequence | MYYSGAFIPY IVLVVVSLVL GLGTQWYIKH EFKKYSLVPS GFNASGASVA RAMMDANGAA
NVGIKRISGE LTDNFDPRDN CLHLSDANFS EGSVASLAVS CHEAGHAVQT AKMFMPARVR
SALVPVVNFA AASWIYVFIA GIWLNISGMT MLAIWLYAFT FLFHVVTLPV EIDASRRGLA
FLKANAPAGF DYAGARKVLI AAALTYVAAA MVSALQLLYL LGSSRNRN
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