| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0627 |
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| Symbol | |
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| ID | 8413487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 704272 |
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| End bp | 706038 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022205 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_003179648 |
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| Protein GI | 257784431 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTTT TATATAACGA CGGTCATGTT GGCGAGATTA ACGATGCAGC TGAAGAGCTT
GAGGTTATTC GCCATGATGC AGCTCATCTG CTTGCCCAAG CCCTGAAGCG TCTATATCCA
CATGCACAGT TTGCCTATGG TCCAGCAACC GAAAATGGTT TTTACTATGA TGTTGATCTT
GGAGACACCA AGGTTAACGA GGATGATTTC CCAGCAATTG AAGCTGAGAT GAAGAAAATT
GTTAAAGAGA ACCTTAAGAT TGAGACCTTT GAGCTTCCTC GCGATGAGGC CGTTGCCTAT
ATGAAGGAGC GCGGCGAATC TTACAAGGTT GAGCACATTG GTGACCTTGC TCCAGACGCA
CACATTACTT TCTATAAGCA GGGTGAATAC GTTGACATGT GCGTTGGTCC TCACATGCTC
TACACCAAGG GTGTTAAGGC ATTTAAGCTG ACGAGTATTT CTGGTGCTTA TTGGAAGGCC
GATAAGAACA ACAAGATGCT CACCAGAATT TATGGTGTTG CTTTTGGCTC TAAAGATGAG
CTTGCTCAGT ACCTCAAGAT GATTGAAGAA GCCGAGAAGC GCGACCACAG GAAGATTGGT
CGTGAGATGG AGCTCTTCAT GATGTCTGAC TTTGGACCAG GTTCTCCTTT CTGGCTTCCA
AACGGTATGG CTTTGCGCAA TGCTCTGACC GAGTACTGGC ATGAGATGCA GGCTCGCTTT
GGTTACCAGG AGGTTCAGAC TCCATTGATC CTCTCGCGTT CTCTTTGGGA GACTTCTGGT
CACTGGGATC ACTACAAAGA GAATATGTAC ACTACCACGG TAGATGAAGA AGACTTTGCC
ATTAAGCCTA TGAACTGCCC TGGTGCTTGT TTGATTTATA AGTCTAAGCC ACGTTCTTAT
AGGGATCTTC CTATGAAGTT GGCTGAGGCT GGACTTGACC ATCGTTACGA GATGAAGGGT
GCTCTGCACG GTCTGTTCCG TGTTCGTGAG TTTACCCAGG ATGATGCACA CCTCTTTATT
CGCCCTGATC AGATTACTGA GCAGGTCACG GATGCTTCTC ATCTCATTAC CGCGTACTAT
GCACAGTTTG GCTTCCCATA TCGTGTTGAG CTTTCTACGC GTCCAGAGGA TTCTATGGGT
TCTGACGAGG ATTGGGAGCG TGCTGAGCAG GGTTTGCGCG ATGCGCTTGA TGCTATGGGC
ATTGACTACG TTGTTAATGA GGGTGACGGT GCTTTCTACG GACCAAAGAT TGACTTCCAT
CTGACCGATT GCCTTGGTCG CTCTTGGCAG TGCGGCACCA TCCAGCTTGA CTTCCAGCTT
CCTCATAACT TCCAGCTTGA GTACATCGAC TCCGATGGCA CCAAGAAGCA GCCAATCATG
ATTCACCGTG CTGGCTTTGG TTCCTTCGAG CGTTTTATTG GTATTTTGAC CGAGAACTAC
GAAGGCAAGT TCCCTGTCTG GTTGAGCCCT TGCCAGGTCA AGATCCTTCC TGTCTCCGAG
AAGTCTCGCT CTTATGCTCA TGAGGTTGCA GATAAGCTTG CAGCTGCTGG TATTCGTGTT
AAGGTCGATG ACCGTGACGA GAAGATCGGC TATAAGATTC GTGAGGCTCG TTCTCTTGAT
CGCGTGCCTT ATATGCTTAT CCTTGGTGAG CAGGAGGTTG AGGCAGGAAA CATTTCTGTT
CGCGATCGCT CCAATGAGAC TCACGCAGCA GAGCTTGACG AGTTTATTGC TCAGGTTGTC
AAAGAGAATT CTGAGCGTAT TGGTTAA
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| Protein sequence | MKVLYNDGHV GEINDAAEEL EVIRHDAAHL LAQALKRLYP HAQFAYGPAT ENGFYYDVDL
GDTKVNEDDF PAIEAEMKKI VKENLKIETF ELPRDEAVAY MKERGESYKV EHIGDLAPDA
HITFYKQGEY VDMCVGPHML YTKGVKAFKL TSISGAYWKA DKNNKMLTRI YGVAFGSKDE
LAQYLKMIEE AEKRDHRKIG REMELFMMSD FGPGSPFWLP NGMALRNALT EYWHEMQARF
GYQEVQTPLI LSRSLWETSG HWDHYKENMY TTTVDEEDFA IKPMNCPGAC LIYKSKPRSY
RDLPMKLAEA GLDHRYEMKG ALHGLFRVRE FTQDDAHLFI RPDQITEQVT DASHLITAYY
AQFGFPYRVE LSTRPEDSMG SDEDWERAEQ GLRDALDAMG IDYVVNEGDG AFYGPKIDFH
LTDCLGRSWQ CGTIQLDFQL PHNFQLEYID SDGTKKQPIM IHRAGFGSFE RFIGILTENY
EGKFPVWLSP CQVKILPVSE KSRSYAHEVA DKLAAAGIRV KVDDRDEKIG YKIREARSLD
RVPYMLILGE QEVEAGNISV RDRSNETHAA ELDEFIAQVV KENSERIG
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