Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0624 |
Symbol | |
ID | 8413484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 701591 |
End bp | 702178 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 645022202 |
Product | GTP cyclohydrolase I |
Protein accession | YP_003179645 |
Protein GI | 257784428 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0302] GTP cyclohydrolase I |
TIGRFAM ID | [TIGR00063] GTP cyclohydrolase I |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAGCAG AAAATAACTA TAAAGAGCTT GATCAAGAGC GTGTAAAAGC TGCGGTCACT GAATTTTTGC TTGCTATTGG TGAGGATCCA GAGCGAGAAG GTCTGCTTGA TACGCCAGAC CGTGTTGCTC GCGCTTGTGT GGAGCTCTTT GGCGGTATGC AGGAAGACCC TGCAGTTCAC CTTCGCAAAC AGTTCCACGA AGAAGGCAAT AAAGAGATGG TTATTGTCCG CGACATTCCT TTCTCATCTA CTTGTGAACA TCACATTTTG CCATTTGTAG GTAAGGCACA TGTCTGCTAC ATCCCACAAA ATGGTCGTAT TACCGGCCTT TCCAAGATTG CTCGCTGCGT CAGCGGATAT TCTCGTCGTC TGCAGGTACA GGAGCGCTTA ACGGGCCAGA TTGCAGATGC CATGGTAGAA GAGCTAGATC CCTTGGGTGT TTTGGTGGTT ATGGAGGCCG AGCATACGTG CATGAGCATG CGCGGCATTA GGGCATCGGG TGCTTTGACC ACTACTTCTG CAGTTCGTGG CATTTTTAAG ACTAACGAGA AAACCCGTGC AGAAGCTATG CGTCTGCTTG GTCTATAA
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Protein sequence | MAAENNYKEL DQERVKAAVT EFLLAIGEDP EREGLLDTPD RVARACVELF GGMQEDPAVH LRKQFHEEGN KEMVIVRDIP FSSTCEHHIL PFVGKAHVCY IPQNGRITGL SKIARCVSGY SRRLQVQERL TGQIADAMVE ELDPLGVLVV MEAEHTCMSM RGIRASGALT TTSAVRGIFK TNEKTRAEAM RLLGL
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