| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0615 |
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| Symbol | |
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| ID | 8413475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 690787 |
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| End bp | 691395 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022193 |
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| Product | Endopeptidase Clp |
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| Protein accession | YP_003179636 |
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| Protein GI | 257784419 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0446476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.853287 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATTATC CAACAAACAT TCCAACCATT CCGTATGTTA TTGAACAGAC TCCTCGTGGT
GAGCGTAGCT ATGATATTTA CTCTAGGTTG CTCAATGATC GTATTGTTTT CTTGGGTGAA
CCTGTAACTC GTGACTCCGC AAACCTGGTC ATTGCACAGC TTTTGCACCT TGAGAGTCAG
GATCCAGATA AGGATATTTC TCTTTACATT GACTCTCCTG GTGGAGACGT TTATGCAGGT
CTGGGCATTC TTGATACTAT GAATTTTATC AAGCCTGATG TTTCTACTAT CTGCGTTGGT
ATGGCAGCAT CAATGAGCGC TGTTCTTCTT GCAGCTGGTG CAAAGGGTAA GCGTCTTGCA
CTTCCTAACT CTATGGTTAT GATTCATCAG CCATCCAGTG GCGTTCAAGG CCAGCAGACT
GACATTCAGA TTGTTGCAGA TGAGACAAAG TGGATTCGCG AGCATATTAA TGAGTTGCTT
TCGGATTATA CTGGACAGTC TATCGAGAAG GTCAATGTAG ACACAGAGCG CGATAATTAT
CTTCGTGCAC AGGAGGCTTG TGACTACGGT CTGGTTGATC GCGTTATCTC TTCTCGTAAC
GATCAATAA
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| Protein sequence | MHYPTNIPTI PYVIEQTPRG ERSYDIYSRL LNDRIVFLGE PVTRDSANLV IAQLLHLESQ
DPDKDISLYI DSPGGDVYAG LGILDTMNFI KPDVSTICVG MAASMSAVLL AAGAKGKRLA
LPNSMVMIHQ PSSGVQGQQT DIQIVADETK WIREHINELL SDYTGQSIEK VNVDTERDNY
LRAQEACDYG LVDRVISSRN DQ
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