Gene Apar_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0611 
Symbol 
ID8413470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp683700 
End bp684299 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content50% 
IMG OID645022188 
ProductDNA-3-methyladenine glycosylase 
Protein accessionYP_003179632 
Protein GI257784415 
COG category[L] Replication, recombination and repair 
COG ID[COG2094] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00567] DNA-3-methyladenine glycosylase (3mg) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.307609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCAG ATTTTCTAGA GAATCCCTCA GATGTAGTTG CGCCACTTCT GCTGGGATGC 
ACTCTAACGA GGACAATTAC GCTTAATGGC GAGAAACACA AACTTGTGGC AAGAATTGTG
GAGACCGAAG CCTACGACCA AGACGATCCT GCAAGTCATG CGTTTGGAGG ATTCAGCGAG
CGCAACGCTG CTATGTTTGG ACCTGCAGGT CATCTGTATG TGTACGTTTC ATACGGTATG
CATCACTGCT GCAATGTGGT GTGCGGATCT GAAGGTTTTG GCAGCGGATG TCTAGTGCGT
GCTGTTGAGC CTCTTGAGGG TATTGAGGTT ATGCGCATAC TCCGCGAAGC GGGTCATGCG
CATAAGCACC CGCTCAAGCT GCGCGACCTC ACTAACGGAC CAGGTAAAGT ATGTGCGGCG
CTTGGCGTTG ACAAGGGGTT ATACAGGCAT GACCTAAAGG TTGAGCCGCT TATTCTGGAC
TTTGCTCCCC TGTTACCAGG TGAAACAATT GATCGCTCAC CTCGCGTAGG CATCAGCAAA
AACGCTGATG CTCTGAAGCG CTTTTTCATC GAGGGCAATA CGTTTGTTTC AAAGTCGTAA
 
Protein sequence
MFPDFLENPS DVVAPLLLGC TLTRTITLNG EKHKLVARIV ETEAYDQDDP ASHAFGGFSE 
RNAAMFGPAG HLYVYVSYGM HHCCNVVCGS EGFGSGCLVR AVEPLEGIEV MRILREAGHA
HKHPLKLRDL TNGPGKVCAA LGVDKGLYRH DLKVEPLILD FAPLLPGETI DRSPRVGISK
NADALKRFFI EGNTFVSKS