| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0605 |
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| Symbol | |
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| ID | 8413462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 674836 |
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| End bp | 675690 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 645022180 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003179626 |
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| Protein GI | 257784409 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.159989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA TGTTGAAGCG GTGGTGGCCA TTATTTGTTC TGCCTACAGC GCTATCTTTT
TTGTTTGGCT TTCTGATTCC GTTTGTACAG GGATTTTATC TTTCATTTTG TAAATTTATT
ACCATTAGCG ATGCTAAACC AGTTGGTCTA GATAATTATG TGGCAGCTTT TTCTGATCCA
CAGTTTGCCC ATGCTTTTTT GTATACCGCA TTATTTGCAC TAGTCTCAAC AGTTCTTATT
AATGTGTTGG CGCTTGCAAT TGCACTTGCC TTAACTAGAA AGAATCTTAA GGGCACCAAT
TCATTTAGGA CTGTCTTTTT TATGCCAAAC CTTATTGGCG GCATTGTCTT GGGTTATATC
TGGAATATTT TGATTAACTG TATACTCTCT ATTGTAGGTG AGCAGCTTCT TGCACTTAAT
AGTACTGCTG GATTCTGGGG AATGATTATT CTTACCCTGT GGCAGCAAGT TGGTTACATG
ATGATTATTT ATATTGCTGG CTTGCAGTCT ATTCCAAGTG ATTATCTTGA AGCAGCACGA
GTTGATGGAG CAAATGCTTG GCAGACGCTT TGGAAGGTAA AAATTCCAAA CCTTATGTCT
ACCATTACTA TTTGTCTTTT TTTGACGGTA ACAAATGGCT TTAAATTATT TGATCAGAAC
TTGGCGCTTA CTGCAGGTGA GCCTAAGCAT ACAACTGAAA TGCTTGCCCT TAATATTTAC
AATACCTTCT ATGCTCGACA GGGAGCAAAG TGGATGGGTA TTGGTCAGGC TAAAGCTGTT
ATTTTCTGCA TTTTAGTTAT TTGTATAGTC ATGATTCAGC TGAGAGCCAC CAGGTCAAAG
GAGGTGCAGC AATAA
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| Protein sequence | MAKMLKRWWP LFVLPTALSF LFGFLIPFVQ GFYLSFCKFI TISDAKPVGL DNYVAAFSDP
QFAHAFLYTA LFALVSTVLI NVLALAIALA LTRKNLKGTN SFRTVFFMPN LIGGIVLGYI
WNILINCILS IVGEQLLALN STAGFWGMII LTLWQQVGYM MIIYIAGLQS IPSDYLEAAR
VDGANAWQTL WKVKIPNLMS TITICLFLTV TNGFKLFDQN LALTAGEPKH TTEMLALNIY
NTFYARQGAK WMGIGQAKAV IFCILVICIV MIQLRATRSK EVQQ
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