| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0603 |
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| Symbol | |
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| ID | 8413460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 672427 |
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| End bp | 673146 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 645022178 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_003179624 |
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| Protein GI | 257784407 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.971454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.271301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGTG TACGGTTTGA TACGATTTAT CAAAATTTGA AAAATAAGAT CTTAGACGGA
ACATACGCAT ATGAGTCCTT TTTACCTACT GAAATGGAGC TCACCAAAAT ATATTCCTGC
TCTAGAAACA CCGTCCGACG GGCGCTTACT CTCCTATCAG ACGAAGCCTT CCTTCAACCA
ATTCATGGTA GAGGTGTCCG CGTTATTTGG CAGAAAAAAC CAAGTGAGGT TATTGGCTCA
CTAGAAGGAC TCGAGTCCTT TCAAGAATAT GCCCATAGAA ATAATCTTGT ACCTGATACA
AACGTCATTG TCTTTGAGCA TATACCGTGT ACAGACGATA TTTCTCATCA AACTGGTTTT
AAAGCGGGCG AAGAACTTAT ACATATAGTT CGAATCCGCA AGCTCAATGG ATCTTCTCGC
CAGATAGATA ACGACTACCT TTTGGCGTCT GCTGCAGGGA ATTTAACCAT TGAAGATGCA
GCAACATCTA TTTTTGCTTA TCTAGAAAAC ACACTTCATA TGAAAATTTT AAAAAGCAAA
AGAACAATCA GTGTTGAGCT GGCAACTGAA GAAGACCGCC AACATTTGGA ACTTGGATCT
TTTAATTGCG TTGCAGTGGT AGAAAGTCAT TCTTTTAACT CAAGAGGCGT TATGTTTGGC
TTTACGCAAA CTCGCAGTCA CCCAGAAACA TTCTGCTATA AGGTTATTTC AAAAAGATAA
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| Protein sequence | MPSVRFDTIY QNLKNKILDG TYAYESFLPT EMELTKIYSC SRNTVRRALT LLSDEAFLQP
IHGRGVRVIW QKKPSEVIGS LEGLESFQEY AHRNNLVPDT NVIVFEHIPC TDDISHQTGF
KAGEELIHIV RIRKLNGSSR QIDNDYLLAS AAGNLTIEDA ATSIFAYLEN TLHMKILKSK
RTISVELATE EDRQHLELGS FNCVAVVESH SFNSRGVMFG FTQTRSHPET FCYKVISKR
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