| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0601 |
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| Symbol | |
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| ID | 8413458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 670463 |
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| End bp | 671392 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022176 |
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| Product | diacylglycerol kinase catalytic region |
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| Protein accession | YP_003179622 |
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| Protein GI | 257784405 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.902429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.638771 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCAAT CCCCTCTTGG ACGCACACTT ATCATAGCTA ATCCCGCTGC TCATAGTGGT
AAAGGCGCTG CAGGTGCGGA ATTTGCTCGA CACTTCCTTA CCAGCTATTC AGCCGCAACG
GATGGATACG AGCTCAAGCT CACCACAGCT ATGGGAGACG CTCGTGTTAT GGCCTCAGAA
GCTGCAGATT TTGACACGGT TGTCACACTT GGCGGAGATG GCGTTATCCA TGAGGTGGTT
AATGGTCTCA TGACCTTATC GCCAGAAACA CGCCCAGCGC TTGGCATTAT CCCTATGGGC
TCTGGAAACG ATTATGCGCG CACACTGGGC ATGAAAATCA ACGATCCAGA AGGCGCTTTT
GCGCAGCTAG TTCGCGGCAA GATTAAGCAA CTAGAGATTG GTCGCATCAA CGACGTCTAC
TTTATGGAAA CTATGTCATT TGGACTTGAC GCAGCTATTG CAATCGATAC CACAAAGCGA
CGTGCAAACA ACTCATCAAC TGAAGGCGAA GCACTCTTCT TTACCTCGGG CCTTAAGTTC
ATGTCTGCAG GTAGCAAGGG TTATCCCTGC ACCGTCTCGT TTGATGGCGA GAAGGACATT
GACCTCCAAG CTCTTATCAT GGCCTTCCAA GTTGGACCTA CATACGGCGG TGGCTTTAAA
GTTTGCCCAC ATGCCCAGCC AGATGATGGT CTGCTCACCG TTTGTTATAA CACCAAAGTC
CCTAATATCC CCCACCTGCT AGCCTTGTTT GGTCTAGCAA AGTCTGGCAA ACACATCAAC
TCCCGTATCA TTGAAGAACG TCATCTCAAA CAAGCAGTGG TAACTTTCCA CAAGCCGGTT
CCTGTTCAGG TTGATGGCGA AGAACTTCCT TTTGCAGAGC AATTTGTCAT TGAGGTCATC
CCCGACGCGC TTTCCGTGGT TGTTCCCTAG
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| Protein sequence | MSQSPLGRTL IIANPAAHSG KGAAGAEFAR HFLTSYSAAT DGYELKLTTA MGDARVMASE
AADFDTVVTL GGDGVIHEVV NGLMTLSPET RPALGIIPMG SGNDYARTLG MKINDPEGAF
AQLVRGKIKQ LEIGRINDVY FMETMSFGLD AAIAIDTTKR RANNSSTEGE ALFFTSGLKF
MSAGSKGYPC TVSFDGEKDI DLQALIMAFQ VGPTYGGGFK VCPHAQPDDG LLTVCYNTKV
PNIPHLLALF GLAKSGKHIN SRIIEERHLK QAVVTFHKPV PVQVDGEELP FAEQFVIEVI
PDALSVVVP
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