| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0600 |
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| Symbol | |
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| ID | 8413457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 668626 |
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| End bp | 670329 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645022175 |
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| Product | phosphoenolpyruvate-protein phosphotransferase |
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| Protein accession | YP_003179621 |
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| Protein GI | 257784404 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
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| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.12696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.706095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGAGG GAGTCAATGC GTCTAACGGA ATCGGCATCG GTGCTGCTCA GGTTGCTGTA
GATCCAGATC TTACTTTTAC TCCGCACACT GTTGAAGACA CTGCTGCAGA GAAGGCTCGT
TACGCAGAGG CTGTAACTAA GTTCATCGCA CAGACTAATG CGCAAATTGA GCGTATGACT
AAGACGGTGG GTGAGGAAGC TGCTGCAATT ATGGGTGCTC ACATTGAGTT TGCAGAGGAT
GAGGGCATCA AAGAGGCCGT TAACAGCGCT ATTGACGGTG GTACCTGTGT TGAGCAGGCT
GTAAGCGACG CATATGACAT GTATTACAAC ATGTTCCTTG GCATGGAGGA TGAACTCTTC
CGTGAGCGCG CAGCAGACGT TGCAGACGTA AAGACTGGTC TTCTCGCTGA TCTTCTTGGC
AAAGAGGTTG TTGACCTCTC TACGCTTCCA GAGAACTCCG TCATTGTCTG CCGTGAGCTG
ACTCCTTCAA TGACCGCAGA TATTGATAAG GACCACGTTG CAGGTATTGT TACCGAGACT
GGTGGTCGTA CTTCTCACTC CGCAATCATT GCTCGTGCTC TTGAGATCCC TGCAGTTCTT
TCTGTTCCTA ACATCACTTC TGAGGTTGCA ACTGGCAACG CTATTGTTGT CGACGGCACT
AACGGCAAGG TTGTTGTTAA TCCTTCTGAG GCTGAGCTTG CTGAGTACAA GGCTCAGGCT
GAGGCTTACG CTGCAGAGAA GGCTGCTCTT GAGGCTTATC GCGGTAAGGA GACCGTAACT
GCTGACGGCA TTAAGGTTCT GCTTGTTGCT AATATCGGTA ATCCAGATGA CGCTAACGGC
GCAGTTGACG CTGATGCTGA GGGTATCGGT CTTTTCCGCT CCGAGTTCCT GTTCATGGAT
GCAAAGGAGC TGCCAAGCGA GGAAGAGCAG TTTGCTGCTT ATCAGAAGGT TGCTCTGCGC
ATGAAGGATA AGCCAGTCAT CATCCGTACT CTTGATGTCG GTGGTGATAA AGAGATTCCT
TATCTCAACA TGAAGGCTGA GGAGAATCCA TTCATGGGCT TCCGCGCTAT TCGCTACTGC
CTTAACAATG CTGAGCAGTA CAAGGTTCAG CTCCGCGCCC TTCTCCGTGC ATCTGCATTT
GGTGACATCA AGATTATGCT TCCTCTTGTC ACTACTGTTG ACGAGGTTCG TCAGGCAAAA
GCTCTTGTTG AGGAGTGCAA GGGTGAGCTT GACGCTAAGG GTGTAGCATA CAACAAAGAT
ATTGAGGTAG GCACCATGAT CGAGACTCCA TCTGCATCTC TGATTGCAGA TAAGCTGGCT
CGTGAGTGCG ATTTCTTCTC CATTGGTACC AATGACCTTA TTGGCTACAC CATGTGCGCC
GACCGTGGCA ATGATCGCGT TGCATATCTC TACGAGGTCT ATCAGCCATC CGTCCTCCGT
TCCCTCAAGT ACCTCATTGG TGAGGGTAAC AAAAAGAAGA TTATGGTTGG CATGTGCGGT
GAGGCAGCTG CAGATCCACT GCTCATCCCA GTCCTTCTTT CCTTTGGCCT GGATGAGTTC
TCCGTCTCTG CTCCATCTGT CCTGCGTACC CGCAAGACCA TTGCAGCTTG GACAAAGGCT
GAGGCAGACG AGCTTACTGC TCGTGTCATG GAGCTTGATA CCGCAGCTGA GGTTAAGGCT
CTGCTTGAGC GTGAAGCTCG CTAA
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| Protein sequence | MFEGVNASNG IGIGAAQVAV DPDLTFTPHT VEDTAAEKAR YAEAVTKFIA QTNAQIERMT
KTVGEEAAAI MGAHIEFAED EGIKEAVNSA IDGGTCVEQA VSDAYDMYYN MFLGMEDELF
RERAADVADV KTGLLADLLG KEVVDLSTLP ENSVIVCREL TPSMTADIDK DHVAGIVTET
GGRTSHSAII ARALEIPAVL SVPNITSEVA TGNAIVVDGT NGKVVVNPSE AELAEYKAQA
EAYAAEKAAL EAYRGKETVT ADGIKVLLVA NIGNPDDANG AVDADAEGIG LFRSEFLFMD
AKELPSEEEQ FAAYQKVALR MKDKPVIIRT LDVGGDKEIP YLNMKAEENP FMGFRAIRYC
LNNAEQYKVQ LRALLRASAF GDIKIMLPLV TTVDEVRQAK ALVEECKGEL DAKGVAYNKD
IEVGTMIETP SASLIADKLA RECDFFSIGT NDLIGYTMCA DRGNDRVAYL YEVYQPSVLR
SLKYLIGEGN KKKIMVGMCG EAAADPLLIP VLLSFGLDEF SVSAPSVLRT RKTIAAWTKA
EADELTARVM ELDTAAEVKA LLEREAR
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