| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0595 |
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| Symbol | |
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| ID | 8413449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 662966 |
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| End bp | 664018 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645022167 |
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| Product | N-acetylmuramoyl-L-alanine amidase family 2 |
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| Protein accession | YP_003179616 |
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| Protein GI | 257784399 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0114709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.325418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACT TTTCAGGCGA GATTACCGCT GACGCGTATA TTCCAACGTC AGCTTATTCA
GCTGGGCGAG ACGGTCATTT CGTGCAGTAT ATCGTGGTAC ATCATGAAGC TGCCATAGGC
TTAGACGGTG CGGCCATTAC TGCCATGTGG GACAGGATGC AGGCACAGTC TGCGCACTAT
TCTGTGGATG GTGCAGGCAC TATCACTCAG CACGTACTGG AGAGCAATAC CGCATGGGCG
TGTGGTCGTT GGACTGCTAA TTGCGAGAGC ATCTCGATTG AGCACGCGAA CAACTCCTCA
TCGCCCTGGA CTGTCTCTGA AGCTACCTTA GAGAGCGGTG CGCACCTTGT TGCTGCGTTG
CTCATTAAGT ACGGGCTCGG ATACCCGCGT TGGGGTGGCA ATGTTCGTCC ACACAAACAG
ATCGTGGCAA CCGCTTGTCC TGGCGAGCTT GCTGGCTCTC AGAACACTCA CTATATGGAG
CGTGTATGTT ACTGGTACGA GGTCATGACA GGCAAACGAT CAACTTCTGA GATTGGTTGG
CATACCGACG GCAAGGGCAG CTGGTGGTAT CAGACGGGCG AGTCATCGAG TGAATACGCG
GTCGGCTGGT ACCGTGTGGG TATGAAGTGG TATTACTTCA ATGAGAAAGG CTGGATGTTA
ACCGGTTGGG TTCACACCGA TGACGGACAC GGTTCAGACA AGCTTTGGTG GTACTTCAAT
GACGACGGTT CGCTTTTTTC CGATGACTGG TTGGAGTACA ACGGCAACTG GTATTTGCTA
GCGTCTGATG GTCACATGGC TACCGGCTGG GTAGAAGATA AAGATAGAGA TAAGTGGTAC
TATCTTGACG AAACAGGGCG CATGATTACT GGCTGGTTGA AGCTCGACAA TGACTGGTTC
TATCTGCGTT CCGATGGCTC ACGAGTTGAG GACTGCTTGT ATGAAGTCGG AGCAGATAAC
ATCTGTGCCT TCGATAAGAA AGGTAAGCTT CTCACAGGCG ACATTACAGT CACAACCAAC
GACGACGGTT ACATCGCAGG AATTAAGGCT TAG
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| Protein sequence | MADFSGEITA DAYIPTSAYS AGRDGHFVQY IVVHHEAAIG LDGAAITAMW DRMQAQSAHY
SVDGAGTITQ HVLESNTAWA CGRWTANCES ISIEHANNSS SPWTVSEATL ESGAHLVAAL
LIKYGLGYPR WGGNVRPHKQ IVATACPGEL AGSQNTHYME RVCYWYEVMT GKRSTSEIGW
HTDGKGSWWY QTGESSSEYA VGWYRVGMKW YYFNEKGWML TGWVHTDDGH GSDKLWWYFN
DDGSLFSDDW LEYNGNWYLL ASDGHMATGW VEDKDRDKWY YLDETGRMIT GWLKLDNDWF
YLRSDGSRVE DCLYEVGADN ICAFDKKGKL LTGDITVTTN DDGYIAGIKA
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