| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0582 |
|---|
| Symbol | |
|---|
| ID | 8413436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | + |
|---|
| Start bp | 653559 |
|---|
| End bp | 653897 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 645022154 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003179603 |
|---|
| Protein GI | 257784386 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.183846 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTTA TTAAAGGTAT TCAAGTTAAG GTTATAAGAA CTTCTGTAAT TACCGATGAC
CATGGCAATG AGATTCCTGG TGTTGAAACT TATGAGCAGG TAGACAATGT GCTTCCTGCT
CCTGTCTCAA CCGCTGACCT CTCAGAGAGC CGTCCAAACG GTGACAAAGT GGATATGATG
TTTCATTTCC CAAAGACCTA TAAACGTAGT CTTAGAGGAG CGTTTATTGA GCATAGCGGC
GTGCGTTTTT CAGTTATTGG AGACCCTCAA CCTTATCTTG ATAGCTTGAC GCCTCTTGAT
TGGGATAGAC CTGTTGAAGC GGTGGTAGTC GATGGCTAA
|
|---|
| Protein sequence | MALIKGIQVK VIRTSVITDD HGNEIPGVET YEQVDNVLPA PVSTADLSES RPNGDKVDMM
FHFPKTYKRS LRGAFIEHSG VRFSVIGDPQ PYLDSLTPLD WDRPVEAVVV DG
|
|---|
| |