| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0580 |
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| Symbol | |
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| ID | 8413434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 652253 |
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| End bp | 653137 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022152 |
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| Product | major capsid protein HK97 |
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| Protein accession | YP_003179601 |
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| Protein GI | 257784384 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0637425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACG GTATTTTAAC TACTTCTGCA ACGCTCCCAG GAGACCTCTC TTCAGAGATT
TTTGCAAATG TCCAGGAGCA GTCTGCTGTT ATGCAGCTTG CAACTCCAAT TGAGCTTCCT
GGACGAGGCA TGACAGTTCC AGTTGTAACT GGTGACCCAG AGGCATCTTT TGTCAATGAG
GGCGAAGAGA TTAAAGTCTC TAATTCCACT CTCGCAGTTA AGGAAATGAA GCCTTATAAG
CTCTCTGTTA TTGAGCTCTT CTCTAATGAG TTCAAGGACA ATTATGAGGC TATCTTCGCA
GAGCTTCAGA ACCGTCTTCC AGGTGCTATT GGTCGTAAAG TTGACTCCAC TATCCTCTAT
GGCACTACTC CAGGCACTGG CTTTGATACT CTTGCAGATA CTGATTCAGT AGACCTTTCT
GCTAAGGCTT ACGACGGCTT TGTAGATGCA CTTGAGAAAG TAGCAACAGC CAACGGCGAT
CTTAACGGTT GGATTTTGTC CCCTAAGGCA CGCACTCTGC TCCTTAAGGC AAAAGACAAC
CAACAGCGTC CTCTCTTTAT TACTAACCCT GCTGTAGAGG GTAAGGATGG CGGTTCTTCT
GTTCTCGCTA TTCCATCTCT CTTCTCTCGT GCGGCTTACC AGGCAAAGAA CCAGGGTAAG
ACACCTGAGC TTGTCGGTGC TGGTGGAGAC TGGACTGGTG CTCGTTTTGG TCTTGTCAAA
GACATTACTG TTTCTTTGGC TGATCAGGCG ACTATCAATG CTGGTGGTAC TCAGATGAAC
CTCTATCAGC GTGATATGTT TGCTCTGAAG TGCACCTTTA TGTTTGGCTT TGTCGTACGT
GATAAAAAGC AATTCGTCCG TCTTGCAAAC GGTACAGCTG CTTAA
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| Protein sequence | MANGILTTSA TLPGDLSSEI FANVQEQSAV MQLATPIELP GRGMTVPVVT GDPEASFVNE
GEEIKVSNST LAVKEMKPYK LSVIELFSNE FKDNYEAIFA ELQNRLPGAI GRKVDSTILY
GTTPGTGFDT LADTDSVDLS AKAYDGFVDA LEKVATANGD LNGWILSPKA RTLLLKAKDN
QQRPLFITNP AVEGKDGGSS VLAIPSLFSR AAYQAKNQGK TPELVGAGGD WTGARFGLVK
DITVSLADQA TINAGGTQMN LYQRDMFALK CTFMFGFVVR DKKQFVRLAN GTAA
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