| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0554 |
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| Symbol | |
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| ID | 8413408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 638113 |
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| End bp | 638922 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022127 |
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| Product | prophage antirepressor |
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| Protein accession | YP_003179576 |
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| Protein GI | 257784359 |
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| COG category | [K] Transcription |
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| COG ID | [COG3617] Prophage antirepressor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.239939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000124341 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGATA CAAGTATACA GGTTTTTAGT TCGCAACAAT TTGGTGAGCT AAGAGCCCTC
AAAGATCTTG ACGGTGAACC ATGGTTTATT GCTCAAGATG TGTGTAGAGC TCTTGGGACT
GATGTTAAAG ATGTTCGGTC AGTTCTTGAA TGTGATGAAG TTTCAAACCT CGATACTATC
GAGGTTTATA AAAAGCCTGG ACGATCTCCG CTCATTGTGT CTGAAGCTGG TTTATATAAT
CTTGTGCTCA GAAGTCGTAA GCCAGAAGCA AAGCCTTTTC GGCGCTGGGT CACGCATGAA
GTACTTCCGT CAATTCGGCG CTCTGGCGGC TACATCGCCA CAGATGGATC AGAAAGCAAT
GAAGACCTTC TCGCTCGTGC GGTTCTAGTC GCAAATGAAG CAATCCAGCG CAAGGATGCA
CAACTTAAAG AGCAGCAACG TCAGCTCTAT GAGAAGGATA CAACCATCAT CGAGCAAGGC
GCCAAGATTG ACGAGCTCGC TCCAAAAGCT GGTATGTATG ACACAGTTAT TAACGTCAAA
GGCACGATGA CGATTACAGA TGCTGCTCGC TATCTTTCGC AGTATGACCC TCAAATAACC
CGCAAACGCC TCTTTGCCCT TCTTCGCGCT GATGGTTTGA TTTGCCGTGT TGGCAAAGCT
CCAACAAAGA AGGGAATTGA GACGGGAAGA TTCGTACAGA TCATGAGCAC CCGTCGAGAT
GGTAAGTCTA ATGAGCCTTA TGCCAGGATG ACGCAAAAAG GCTTTGACTG GTGCGTTACC
GCTTACTGTA CAGCTCCGCT CATTAATTAG
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| Protein sequence | MDDTSIQVFS SQQFGELRAL KDLDGEPWFI AQDVCRALGT DVKDVRSVLE CDEVSNLDTI
EVYKKPGRSP LIVSEAGLYN LVLRSRKPEA KPFRRWVTHE VLPSIRRSGG YIATDGSESN
EDLLARAVLV ANEAIQRKDA QLKEQQRQLY EKDTTIIEQG AKIDELAPKA GMYDTVINVK
GTMTITDAAR YLSQYDPQIT RKRLFALLRA DGLICRVGKA PTKKGIETGR FVQIMSTRRD
GKSNEPYARM TQKGFDWCVT AYCTAPLIN
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