| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0542 |
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| Symbol | |
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| ID | 8413396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 628853 |
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| End bp | 629875 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 645022115 |
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| Product | aspartate-semialdehyde dehydrogenase |
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| Protein accession | YP_003179564 |
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| Protein GI | 257784347 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
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| TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.15882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000411486 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTTTTG ATCCCAACGG TAAGGTTGTT GCAATTCTTG GTGCTACTGG TGTTGTTGGC
GCTCAGATGA TGCAGTGCCT TGAAGAGCGT AATTTTCCTA TTAAGGAGCT GGTGCTCTTA
GCGTCTGCTC GAAGTGCAGG CAAAACTATC AACTTTATTG GTCAGCAGAT TGTTATCCGT
GAGGCAACTC CCGAGGCTTT TGAGGGAGTT GACATTGTTC TTGGAGCGGC CGGTGACGAG
CAGGCAAAAG AGTTGCTCCC TGAAGCAGTT AAGCGCGGGT GCGTCTGTGT TGACAATTCC
CATGCGTTCA GAATGGATCC CGATGTTCCG CTGGTAATTC CAGAGATTAA TGCCGAAGAC
ATCAAGGGAC ATAACGGCAT CATTTCTAAT CCAAATTGTG CAACCATTAT TGGCCTGGTA
CCTCTGTATC CTCTACATAA AGTAGCAGGT GCTAAACGTA TTATTGCTTC TACATATCAA
GCTGCATCAG GTGCCGGTCT TCCTGGTCTT ACTAGCTTGA AGAACCAGAT GGCTGACGTT
GTTGCAGGCA GGAAAGTAAC CGAGACCACT CCTTTTGCAT ACCAGCTGGC AGTCAACCTG
ATTCCACAGA TTGGTGGCTT TGATGAGGTT GGCTACACCT CCGAGGAAAT GAAGATGCAA
AACGAGGGAC GTAAGATTAT GCATCTTCCT GAACTGCGCG TTAATTGTAC TTGCGTCCGC
GTTCCAATAA TGCGCTCTCA CTCCGAATCC ATCACTGTTG AGTTTGAGCG TCCTTTGAGC
CCAAATGAAG CTCGAGCTAT TCTTGAGGAT GCACCGGGTA TCAAGGTTGT GGACAATCCT
GCAGAGCTTC AGTACCCGAT GCCTCTTGAT ACCTCCGATC AAGATCTTAT TTATGTTGGA
CGTATTCGAG AGGACCTCTC TGCTGATAAG AACACCAATG CATTGACGTT TTTCTGCTGC
GGTGACCAGA TTAGAAAGGG CGCCGCAACT AATGCTGTCC AGATTGCAGA GTATCTGCTG
TAA
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| Protein sequence | MAFDPNGKVV AILGATGVVG AQMMQCLEER NFPIKELVLL ASARSAGKTI NFIGQQIVIR
EATPEAFEGV DIVLGAAGDE QAKELLPEAV KRGCVCVDNS HAFRMDPDVP LVIPEINAED
IKGHNGIISN PNCATIIGLV PLYPLHKVAG AKRIIASTYQ AASGAGLPGL TSLKNQMADV
VAGRKVTETT PFAYQLAVNL IPQIGGFDEV GYTSEEMKMQ NEGRKIMHLP ELRVNCTCVR
VPIMRSHSES ITVEFERPLS PNEARAILED APGIKVVDNP AELQYPMPLD TSDQDLIYVG
RIREDLSADK NTNALTFFCC GDQIRKGAAT NAVQIAEYLL
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