| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0541 |
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| Symbol | |
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| ID | 8413395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 627522 |
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| End bp | 628850 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022114 |
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| Product | aspartate kinase |
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| Protein accession | YP_003179563 |
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| Protein GI | 257784346 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.116539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000501097 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTAAAA TTGCAAAATT TGGTGGCTCA AGTGTTGCCT CCGCAGAGCA GTTTAAAAAA
GTTAAGGCTA TTGTTGAGGC TGACCCTGAT AGATGCTTTA TTGTTTCGTC TGCAGCAGGA
AAGCGTCATT CAACTGATAA TAAGATTACT GACCTTTTAT TGCTGGTAAA TGCTCATATT
GAGTATCACG TTGACTGCAC TTCTTTGCTT GCAGATATTG AGGCTCGCTT TGTAGAGATT
GCTGACGAAT TGGGAGTTAC ATGGCCTGTT GCTAAGGAAT TTAAGAAGTT TGCTACAAAC
ATCAAGTCCT TCTCGCCAGA GTATGTAGTG AGTAGGGGTG AGTGGTTTAC CTGCCAGATT
CTTGCTGAGT ATCTGGGATT GCCATTTGTT GATGCTGCCG ACGTCATGCT GTTTCATCAT
GATGGCACCA TCGATATGGA GCGCACTGCT TCTAGAATTA AAGGAGTAGT TGCTCGTAGT
GGTTCTTTTG TACTGCCTGG TTTCTACGGC GCTACAGTTG ACGGTGCAAT TAAGCTGTTC
CAGCGCGGTG GCGGCGATAT TACCGGTGCC ATTGTGGCTC GCTGCTTAGA CGCGGACTTG
TACGAGAACT GGACTGACGT GTCCGGCTTC CTTTCTGCTG ATCCTCGCAT TGTGCAGAAT
CCGCGTGCCA TCGGCCGTAT TACCTTTGAC GAGATGCGCG AGCTTTCTTA CATGGGTGCT
TCCGTTCTTC AGGAGGAGGC AATTTTCCCT GTTCGAGAGG CAAACATTCC AATCCAGATT
AAGAATACGA ACCGTCCAGA AGATACAGGT ACTGTGATTC GTGAAACCGC TGATGGTGAT
GTGAGCGAGC ATCTTATTAC CGGCATTGCA GGTAAAAAAG ACTTTTTAGC AATTCATGTT
AAAAAAGCAC ACATGTCCAA CGAGGTTGGC GTAATTAGTC GTGCACTCAA TATTGTTGAA
CGCTATGGTG TTTCTGTTGA GCATATTCCA ACAGGCGTTG ATTCATTTGG TATTGTGGTC
AATGCTTCTG ACGTAAAAGA TACGGTTTAT TCCATCATCA GCGATATTCG TCGCGAGATT
GAACCTGATG ATATTACGAT GGTAGACCGT CTAGCTCTCG TCTCTGTTGT TGGCCGTAAT
ATGTCTAGGC GCTCCGGTAC CTCTGGCAAG ATTTTTGGTG CGCTGGGTAA TGCGGGCGTC
AACATTCGTA TGATTACGCA GAGTTCTGAA GAGATTAGCA TTATCGTGGG AGTCGATAAT
ACCGACTTTG ATCGCACAAT TGGCGTCATT TACAACGGAT TTGTTCGTGA CGAAATGGTT
TCGAGGTAA
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| Protein sequence | MIKIAKFGGS SVASAEQFKK VKAIVEADPD RCFIVSSAAG KRHSTDNKIT DLLLLVNAHI
EYHVDCTSLL ADIEARFVEI ADELGVTWPV AKEFKKFATN IKSFSPEYVV SRGEWFTCQI
LAEYLGLPFV DAADVMLFHH DGTIDMERTA SRIKGVVARS GSFVLPGFYG ATVDGAIKLF
QRGGGDITGA IVARCLDADL YENWTDVSGF LSADPRIVQN PRAIGRITFD EMRELSYMGA
SVLQEEAIFP VREANIPIQI KNTNRPEDTG TVIRETADGD VSEHLITGIA GKKDFLAIHV
KKAHMSNEVG VISRALNIVE RYGVSVEHIP TGVDSFGIVV NASDVKDTVY SIISDIRREI
EPDDITMVDR LALVSVVGRN MSRRSGTSGK IFGALGNAGV NIRMITQSSE EISIIVGVDN
TDFDRTIGVI YNGFVRDEMV SR
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