| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0539 |
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| Symbol | |
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| ID | 8413393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 624637 |
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| End bp | 626145 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022112 |
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| Product | threonine synthase |
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| Protein accession | YP_003179561 |
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| Protein GI | 257784344 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0498] Threonine synthase |
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| TIGRFAM ID | [TIGR00260] threonine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0259397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000259641 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGCCGTCG CATATCACAG CACAAGAAGC TTTGATCATA CCGTCTCGGC TAAACAGGCC
ATTTTGCAGG GAATTGCTCC CGATAGCGGC CTCTACATCC AAGATTCTAT TGGCGAGAAA
CCCCTTGATC TTGTAAAGGT TTGCTCCCAG GACTTTAAGT CTACAGCTTA TGACGTACTT
TCTACTCTGC TTGATGACTA CTTGCCTGAG GAGTTGAATC GCTGTATTGA AGGTGCATAT
GGCACTCAGT GGGACACCAA GACCATTACT CCTGTTTCTG CTATCGGAGA TGATTGGCTG
CTTGAGCTCT TCCATGGTCC GACATCTGCC TTCAAAGACG TTGCACTTCA GATGCTCCCT
CGCTTGATGA GCGTTGCTCG CGAAGACACA AATGCAGCTA GTACTAGCGG TCAGAATATT
ATGATTGTCA CCGCTACTTC TGGAGACACT GGTAAAGCTG CACTTGAAGG CTTCAAAGAT
GTACCAGGTA TGGGTATTAC CGTTTTTTAT CCAGAGGGTA AAGTCTCGGA TATTCAACGC
CTACAGATGG TGACCCAAAA AGGCTCAAAC ATTGCTGTTT GTGCTGTTAA TGGCAACTTT
GATGATGCAC AAAATGCCGC TAAAGCAATC TTTGCTAACA AAAAATTAGC TCAGGAATTA
GCCGGCAAAA ATACTGTACT TTCCAGCGCA AACTCAATTA ATATTGGTCG TTTAGCTCCA
CAGGTAACCT ACTACTTTGA CGCATATGCT CAACTAGTTG CCAAGGGCAC TATTACGCTG
GGTCAAAAGA TTACCTTCTG CGTTCCAACT GGCAACTTTG GCGATGTCCT TGCTGGATAC
TTTGCAAAAG AGATGGGATT ACCTGTTGAT CGCCTTATCG TGGCTTCTAA CAGCAATAAA
GTGCTAACTG ATTTCTTAAC AACAGGCACC TATGACCGTA GACGTGCATT TGAAAAAACC
ATCTCTCCAT CAATGGATAT TCTAGTTTCA TCAAATCTTG AACGACTTCT CTATCTTGCA
TCCGGCAAAG ACACCGAGCT TGTCAGCTAT CTGATGAACC AGCTGGTAAC TAAGGGTATC
TACACAGTGC CTGCTCAGGT GATGGACACC ATCCGTGAAA CCTTTGACGC TGGCTTTGCC
ACCGACGACC AGACGCGAGA AACCATTCGT TCTACCTGGG AGAATTGTCG TATGCTGATT
GATCCTCACA CAGCTGTTGC AAAACACGTA CTTGACAGGG TTTCTCGCCA AACAAACGAC
GTGCGCATAT GTCTGTCCAC TGCAAGTCCA TACAAGTTTT CGTCCGACGT GCTTGCCGCG
CTGGGTCACT CGACCGCTGA CCTGAATGAC TTTGCGTGCA TGCATACGCT CGCCGAAATC
ACAGGCACTA ATCCGCCAAT CCAGCTTTCA TCGCTGAATG ATAACGTTAT CATTCATACT
GACGTTCGCG AGAAGGAAGA ACTTGCTTCG TACGTTTTTG AGGCATGCGA ACGTATTTTT
GCTTGTTAG
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| Protein sequence | MAVAYHSTRS FDHTVSAKQA ILQGIAPDSG LYIQDSIGEK PLDLVKVCSQ DFKSTAYDVL
STLLDDYLPE ELNRCIEGAY GTQWDTKTIT PVSAIGDDWL LELFHGPTSA FKDVALQMLP
RLMSVAREDT NAASTSGQNI MIVTATSGDT GKAALEGFKD VPGMGITVFY PEGKVSDIQR
LQMVTQKGSN IAVCAVNGNF DDAQNAAKAI FANKKLAQEL AGKNTVLSSA NSINIGRLAP
QVTYYFDAYA QLVAKGTITL GQKITFCVPT GNFGDVLAGY FAKEMGLPVD RLIVASNSNK
VLTDFLTTGT YDRRRAFEKT ISPSMDILVS SNLERLLYLA SGKDTELVSY LMNQLVTKGI
YTVPAQVMDT IRETFDAGFA TDDQTRETIR STWENCRMLI DPHTAVAKHV LDRVSRQTND
VRICLSTASP YKFSSDVLAA LGHSTADLND FACMHTLAEI TGTNPPIQLS SLNDNVIIHT
DVREKEELAS YVFEACERIF AC
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