| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0535 |
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| Symbol | |
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| ID | 8413389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 620768 |
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| End bp | 621973 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022108 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003179557 |
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| Protein GI | 257784340 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000217655 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACTAAAA TGTATCCACG CGATAATAAC CACAACCCAG TAATTGTCAC TGGTTTTGGT
GGAAAAGATG GTCAGCGTCG TGAGCTTACT ATGCCTGCTC GCTATGCTAT CAATGCAATT
CTTGTTGCAC TTTTTGTTTT TGGTGGAAAC TTCCTGGTAG GAGAGGGCCT TATTTCTCGC
TATCAGACTG TTGTTTTTGA ACAAATCGGC GTATATGTAC TGATGACCGT TTCTCTGAAT
ATTGTTACTG GATATTTGGG ACAGCTTCCT TTAGGTCACG CTGGCTTCAT GTCCATTGGT
GGTTACGCCT GCGCAATTTT TATTATTCGC ATGATGCCGC TCTTTGGACT GGATGCTCAA
TCCATGGCTT CAGGCTCTAC ACCAGCAGTG ATCCTCTTTG TTGTTGGTCT TTTGTTTGGT
GGTATTTGCG CTGCTCTCAT GGGTATGGTT ATTGGTATTC CAGCACTTCG TCTTCGTGGC
GATTATCTGG CCATCATTAC CTTGGGCTTT GCAGAAATTA TTCGTGTTGT CTTGGTGAAC
ATTGACTCTG CTCTTGGCTT TAAACTTACT GGCGGTGCAT CTGGTCTGAC AGGTATTCCT
GCCTATACGG GTTACCTGAA TACTGCGATT GTTGTTTCAC TTGCCATTTT TGCTATTCAT
ACTCTCATGA AGTCCAGACA CGGCCGCGCT ATTCTCGCTA TCCGCGATAA CGAGATTGCA
GCAGAGGCAT CTGGCGTTAA TACTACGTAT TACAAGACTC TTGCCTTTGT TTTCTCAGCG
TTCATTGCTG GTATTGCTGG CGGTCTTTAC GCAGGCTGCA TTGGCGTCAT GGCACCAGCA
AAGTTTGGCT TCATGAAGTC TGTTGAAATT CTAGTTATGG TTGTTTTGGG TGGCATGGGT
TCTATGTTTG GCTCCGTTGT GTCCGCAACT GTCCTGACCG TACTTCCAGA GGCTTTACGT
GCCTTTGCAG ACTACCGCAT GGTTGCTTAC GCAATCGTGT TGATTCTGGT CATGATTTTT
AGGCCAGAGG GCCTGTTTGG CTCATATGAC TTCTCGCTGT CTCGCATCAT AGAGCGAATC
ATGAACAGGG ATTTCCCTTG GAATAAAGAT GACTCGGATG AGCAGGCGGG CGTACAGGTC
AACGCGCAGG CGGGTGTCCA GGCAGATACG CAGGCAGAGG TCTCAACTGA TTCGAAGGAG
GTGTAA
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| Protein sequence | MTKMYPRDNN HNPVIVTGFG GKDGQRRELT MPARYAINAI LVALFVFGGN FLVGEGLISR
YQTVVFEQIG VYVLMTVSLN IVTGYLGQLP LGHAGFMSIG GYACAIFIIR MMPLFGLDAQ
SMASGSTPAV ILFVVGLLFG GICAALMGMV IGIPALRLRG DYLAIITLGF AEIIRVVLVN
IDSALGFKLT GGASGLTGIP AYTGYLNTAI VVSLAIFAIH TLMKSRHGRA ILAIRDNEIA
AEASGVNTTY YKTLAFVFSA FIAGIAGGLY AGCIGVMAPA KFGFMKSVEI LVMVVLGGMG
SMFGSVVSAT VLTVLPEALR AFADYRMVAY AIVLILVMIF RPEGLFGSYD FSLSRIIERI
MNRDFPWNKD DSDEQAGVQV NAQAGVQADT QAEVSTDSKE V
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