Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0534 |
Symbol | |
ID | 8413388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 619885 |
End bp | 620757 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645022107 |
Product | inner-membrane translocator |
Protein accession | YP_003179556 |
Protein GI | 257784339 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000179103 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTTTTTAA CTCAGGTGCT CAATGGACTT CAATTGGGCA GTATTTATGC ACTGGTGGCG CTTGGTTACA CAATGGTGTA CGGCATCATC TTGCTTCTTA ACTTTGCACA TGGTGACATC ATCATGTTTG GTTCCTACGT TGCATGGATT GCTCTTGTTC AGCTAGGACT TAATCCAGCA ATCGCTGTTC TTCTCGCCAT TTTTGGTTGT GTTGTATTGG GTGTCCTTAT TGATAAGGTT GCATACGCAC CACTCAGAGA AGCTCCAAGG CTTTCTATTC TGATTACTGC AATTGGTGTT TCTTATTTGC TCGAGAATGG CGTTCAGTTG CTTCTTGGCG CTGATGCTAA GGTTATTCCA AACATCATCG ACCTGGGAAC CGTTCAGGTA TTTGGCTCAA CGCTTTCTGG TACTGCACTT TTAACAGTTG CTGTCACTAC TTTAGCAACC GTTGCCCTGA CCGTTTTGGT TCAGAAGACT CGTCTTGGTA AGGCAATGCG CGCCGTTTCG GAGGACATGG GTGCTGCTCG CCTGATGGGC GTTAATGTCA ACAGTACTAT CAGCTTTACC TTTGCGGTTG GTTCTGCGCT TGCAGGTATT GCTGCAATCT TGTATTCAAT GGCATATCAG CAGGTTTCTC CAACCATGGG CGTTATGTTG GGAACTAAGG CATTTGTTGC AGCGGTTCTC GGCGGTATTG GCTCTATTCC AGGTGCTGTT ATTGGTGGTC TTATTGTTGG CTTTTCCGAG GTCTTTGTTG CTGCCTTTGG CTTGTCTGTT TGGCAGGACG CAGTAGTCTT CTTACTCTTG ATTCTTGTTC TTGTTGTCAA ACCAACTGGC TTGCTTGGTC GACCAGTTAC TGAGAAAGTG TAA
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Protein sequence | MFLTQVLNGL QLGSIYALVA LGYTMVYGII LLLNFAHGDI IMFGSYVAWI ALVQLGLNPA IAVLLAIFGC VVLGVLIDKV AYAPLREAPR LSILITAIGV SYLLENGVQL LLGADAKVIP NIIDLGTVQV FGSTLSGTAL LTVAVTTLAT VALTVLVQKT RLGKAMRAVS EDMGAARLMG VNVNSTISFT FAVGSALAGI AAILYSMAYQ QVSPTMGVML GTKAFVAAVL GGIGSIPGAV IGGLIVGFSE VFVAAFGLSV WQDAVVFLLL ILVLVVKPTG LLGRPVTEKV
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