Gene Apar_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0527 
Symbol 
ID8413381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp609503 
End bp609922 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content52% 
IMG OID645022100 
Producthypothetical protein 
Protein accessionYP_003179549 
Protein GI257784332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0910914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000024348 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCTGTCG AGAAACCCGA AGAGCTCAAA ACTACCCCAG TGCTACAGAC AGCCGCTCTA 
ACGGACGCAG AGCGCGCTGA GCTTGAGGCG TTGCGTGCAG AGAAGGAACG CAGGGAGCTC
GAGGCATTGC GTGCCGAGAA GACCCGTACA ACTCAAGTAA AAACTGCAGC TCAAGTAGAG
GCGCCTGCCG TTGCCGAAGA TGCTCAGCTT CGAGCGGCTC AGCAGCGTGC TGCACACCAA
GCAGCTCAGC AGGAAGCTGA GCAAATTCGT CGCATTCAGG AGCAACGCGC AAAAGGCCGC
GCTCTCATGG AGCCAGATGA GGACGATGAA GATATTAAGA TGCCTCTGGG GCAAAAAATT
GTTATTGGAA CTGTGGTAAT TCTCGCAGTT ATTTTTGTTG TAAGCCAATT TATTTTGTAG
 
Protein sequence
MSVEKPEELK TTPVLQTAAL TDAERAELEA LRAEKERREL EALRAEKTRT TQVKTAAQVE 
APAVAEDAQL RAAQQRAAHQ AAQQEAEQIR RIQEQRAKGR ALMEPDEDDE DIKMPLGQKI
VIGTVVILAV IFVVSQFIL