| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0513 |
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| Symbol | |
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| ID | 8413364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 591561 |
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| End bp | 592712 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645022083 |
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| Product | aminotransferase class I and II |
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| Protein accession | YP_003179535 |
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| Protein GI | 257784318 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00548158 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCTAT TAAGAAATAC AACACTAGAG CTTTTCAAAC TCTCTGGCAT TAGGCGTTTC
TCGGCACTTG CTGCTGCAAC ACCGGGTTGT ATTTCTTTAA CCATTGGAGA GCCAGGAGAA
GACACTCCAT CCTCCATTTG CAATCAAGTA GACAAAGAGC TTGCGGCTGG AAACACTCAC
TACCCACCTA ACATTGGTAC TCCTGAGCTT AGAAGTGCGA TTGCTGCTTG GGAGTCAGCT
CGTGGAATGA AGGTCAGTCC AGACGGCATT GTGGTTACCG TGGGAGCAAC AGAGGCTATT
TCTGCTGCCA TGTTGACGCT TATGAATCCA GATGATGAAG TTATCATCCC TGAACCAGCG
TATTTGGTAT ATAGAACGCT TTGCCAGCTT AATCGTGGTG TTGTTGTGCC GCTTGATACC
AGTGGTAATC ATTTCCAGAT TGATTCAGAG CAGCTTAAGT CAAAGATTTC CGAGAAGACA
AAGCTCATGG TGCTGACTTC TCCAAATAAT CCTACGGGAT GTGTGTATAC AAAAGAGTCG
CTTGATGCGG TGGCAGAGCT TGCTCGCAAG CACGGCTTTT ATGTTTTGTG CGATGACGTT
TATAGAGAGC TTACGTACGT TCAGAATGTC CCTCGTTTTG CTGAGCTCTA TCCAGATTTG
GCTGATAGAT GCATTGTGAC AAATAGTTTC TCCAAACCAT GGGCAATGAC AGGTTGGAGA
CTTGGCTGGG TTGCCACCTC TGATGAGCTT GCGGCAGATA TTGGAAAGGT CCACGCTCAG
CTGGTCTCTT CCGTTCCTTC TTTTTTACAG CCAGCTGCTT TGTATGCACT TTCCTACGAT
GTCACGCCTA TGCGCACAAA TTATCAAAAG CGCAGGAAGA TTGTTCTTTC TGCACTTGAA
GACATGAAGC TTCCTGTTGA AGAGCCAGAA GGCGCCTTCT ATGCATTTCC TTCAATCAAG
GAATTTGCCA TTGATTCTGA GGCGTTTTGT GAGCGAGCAA TTAAAGAGTT TGGTGTTGCA
TTGGTGCCTG GTGTTTTCTT TGGCGCTGAG GGGTATGTGC GTATCAGTTA TGCTGCTTCT
GACAAGAATC TGACAGAAGG TCTTTCTCGC CTTAAGATTT TTGTTAATAC TTTGCGAGAA
GAACAAAACT AA
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| Protein sequence | MSLLRNTTLE LFKLSGIRRF SALAAATPGC ISLTIGEPGE DTPSSICNQV DKELAAGNTH
YPPNIGTPEL RSAIAAWESA RGMKVSPDGI VVTVGATEAI SAAMLTLMNP DDEVIIPEPA
YLVYRTLCQL NRGVVVPLDT SGNHFQIDSE QLKSKISEKT KLMVLTSPNN PTGCVYTKES
LDAVAELARK HGFYVLCDDV YRELTYVQNV PRFAELYPDL ADRCIVTNSF SKPWAMTGWR
LGWVATSDEL AADIGKVHAQ LVSSVPSFLQ PAALYALSYD VTPMRTNYQK RRKIVLSALE
DMKLPVEEPE GAFYAFPSIK EFAIDSEAFC ERAIKEFGVA LVPGVFFGAE GYVRISYAAS
DKNLTEGLSR LKIFVNTLRE EQN
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