| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0490 |
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| Symbol | |
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| ID | 8413339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 560916 |
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| End bp | 561680 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645022058 |
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| Product | protein of unknown function DUF152 |
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| Protein accession | YP_003179512 |
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| Protein GI | 257784295 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1496] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000444061 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCTG AGGTTCCATG CGGGGTCACG CTCGCATTTA CTGAGCGTAC GGGTGGTTTT
TCAAAAGGGG AGTTTGCTTC CCTTAATTTA GGCGGTAGAT GCGGGGACAA TCTGCAACAT
GTGCAGAAGA ATCGCCAGCT GGTTCTAGAA GCTCTTGGAG CGGGCGAGCA CTTCTCGCGA
CTCCTTATTC CTCATCAGGT ACACGGAAGC ACTGTTGTCT GTTTGTCTTC CGATACATCA
GAGGCTTTTG AACAGGCTAA GACTGAGGCA GAAGCTGGTG CAGACGCTAT AGTGTGCACC
GTGCAAAATA CACCCGTGCT TTTGGCGTTT GCCGATTGTG TGCCGGTAAT TCTAGTGGCT
CCTGGTGGAT TTGCGGTGGC GCATTCAGGT TGGAAAGGCA CAATTGCTCG CATTTCAGCT
TGCACAACAG AGACTCTTTG CCAGGCAACT GGCGCCAAAC CTTCCGAGGT CAAAGCATAT
ATTGGACCAC ATATTGGCAG TGCTGACTAC GAGGTTTCTT CTGAGCTTAT TCAGATGTTT
TCGCAAGAGT TTGGCCCCAA TGTTGTGGAC CGTGCATCTG GCGAGAGGTA CCTTGATCTT
GGATATGCTG TTAGAGCTGC GCTGATAGAT GCTGGTGTAC GTGAGTCTGC TATTGAAGAG
GTAACTGACT CGACGGCCTC TACAACAGAG CGGTTCTTCT CGTATCGTGC TGAGCATGGC
AAGTGCGGAA GGCATGCGGC TGTTGCTTAC ATGGCTGCAA AGTAG
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| Protein sequence | MDPEVPCGVT LAFTERTGGF SKGEFASLNL GGRCGDNLQH VQKNRQLVLE ALGAGEHFSR
LLIPHQVHGS TVVCLSSDTS EAFEQAKTEA EAGADAIVCT VQNTPVLLAF ADCVPVILVA
PGGFAVAHSG WKGTIARISA CTTETLCQAT GAKPSEVKAY IGPHIGSADY EVSSELIQMF
SQEFGPNVVD RASGERYLDL GYAVRAALID AGVRESAIEE VTDSTASTTE RFFSYRAEHG
KCGRHAAVAY MAAK
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