| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0485 |
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| Symbol | |
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| ID | 8413334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 554833 |
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| End bp | 555966 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 645022053 |
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| Product | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase |
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| Protein accession | YP_003179507 |
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| Protein GI | 257784290 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
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| TIGRFAM ID | [TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0760101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAC AGAAGAAACT CTCTGTTGCA ATTGCTGCAG GTGGAACCGC AGGTCACATT
AACCCAGCTC TGGCTTTAGC CGAGGAGCTT CGCGAGCGCG GCCACCAGGT TACGTTTTAT
GGTCAGCCCA ACAAACTTGA GGGTACGCTG GTGCCTGAGG CAGGATTTGA GCTGGTGCCT
ATCCATGTAA ACGGCTTTGA TCGCAGGCGT CCTTGGACGC TCATGAGCGC AGCATATAAT
CTTGAGCGTG CAAAATTGCA GTTGCATAAG CGTTTTAAAG AGCAAGGTTC TCCTGATGTT
GCTATTGGTT TTGGTGCATA TGTTGAGTTG CCCCTGCTTC AGCTCTGCGC AAAACTTCAC
ATTCCGTATT TAATTCATGA GCAGAATTCG GTGACAGGTC TTGCTAACCG TGTTTCTGCT
GGTAAAGCCG CTAAGGTATG TATTGCGTTC CCAGAGGCTC GCAAGGCATT TGAAGGACAC
GTAAAAGCTC AGAACACTAT TGTGGTTACA GGCAATCCTG TGCGTAAGAG TGTTCTCTCT
GCTGACAGAG CTGCTTCTAG GCAATGTTTG GGTATTGCAG ATGATCAGAT ATTACTGCTT
ATCTTTGGTG GTAGCCTGGG TGCTCGTAGT ATCAATGAGA CATTTGCTAC TCTTAAACAG
GAGCTTCTTG CTCGCCCCAA TCTCCGTATT ATTCAATCAA CAGGTCAGAA GCTCTATGAC
GAGGTTGTCT CGCTTATGAA GCTCACCGAT AAAGAAGCTG CTCGTTGGGA GGTTAAGCCC
TATATCTCCA ACATGGGTGC TACGCTTGCT GCTGCTGACC TGGTGGTTTC TCGTTCCGGG
GCATCTTCTG TAGCTGAGAT TGCAGCCCTT GAGCTCCCAA GTATTTTGGT GCCGTACCCT
CTGGCAACAG CAGATCACCA GACCACTAAC GCGCATTTGT TGTCGGATGC AGGAGCAGCT
ATTTTGGTAC CAGATAACCA GGTAGGCACA ACGTCCTTCT CGACAGCTCT CTTTAATCTG
GTAGATAACG CAGACCAGCG TAAAAAGCTT TCAGAGGCTG CCGCTACACT TGACCAGCGC
AGTGCCGCAT CTCTTGTAGC TGACGCTGTG GAAAGTGCCG TTTGTGGCGT ATAA
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| Protein sequence | MAEQKKLSVA IAAGGTAGHI NPALALAEEL RERGHQVTFY GQPNKLEGTL VPEAGFELVP
IHVNGFDRRR PWTLMSAAYN LERAKLQLHK RFKEQGSPDV AIGFGAYVEL PLLQLCAKLH
IPYLIHEQNS VTGLANRVSA GKAAKVCIAF PEARKAFEGH VKAQNTIVVT GNPVRKSVLS
ADRAASRQCL GIADDQILLL IFGGSLGARS INETFATLKQ ELLARPNLRI IQSTGQKLYD
EVVSLMKLTD KEAARWEVKP YISNMGATLA AADLVVSRSG ASSVAEIAAL ELPSILVPYP
LATADHQTTN AHLLSDAGAA ILVPDNQVGT TSFSTALFNL VDNADQRKKL SEAAATLDQR
SAASLVADAV ESAVCGV
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