| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0474 |
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| Symbol | |
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| ID | 8413323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 540884 |
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| End bp | 542515 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645022042 |
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| Product | DNA repair protein RecN |
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| Protein accession | YP_003179496 |
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| Protein GI | 257784279 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0497] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.51796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGATG AACTTCGCGT GCAAAATGTT GCACTCATTG ATGATGCCTC TTTTGCTCCC
GCCTCTGGCT TAACTGTTTT AACGGGAGAG ACAGGTGCTG GTAAAACTGC TCTTTTATCC
TCTATTAAGC TCTTAGTTGG TGAGCGTGCA GATGCTTCTG CAGTCAGAGA AGGAACGGAT
GCTCTTCGGG TTGAAGCACG TTTCTTTACC TCTTCAGAAG ATCAAGAGGG AATTGTGGTC
TCTAGAAAAG TCTCTGCTGA TGGTAGAGGT AGAGTAGAGA TTGATGGTCA CATGGCATCA
GTTAAAGAGT TGGCTGGGGG TATTGGAACC TCAATTGATC TTTGCGGACA GCATGAACAC
CAAAGACTTC TTGATGTAAA AAATCATGTC AGCATGTTGG ATGCATGGAT TGGGCCAGAT
ATTCAGTCTT ACCAGGCAGA GTATAAAGAC GCTCTACATG CTTACTATGT TGCAATTGCC
GAGCTCCAAC GAGTTATTGA AGTAAGCCAG TCAAGTAACG CAAAAATTGA TGAAGCATCA
TTTCTTGTCC AAAAAATTGA TGAGGTTTCT CCTAAAGAAG GAGAGTTAGA AGATTTAGAG
GAACAACTTC CTCGGTTTGA GCATGCAGAA GCACTCCTTC AAGCTGCGGG AGGAACACAT
GAGTTACTCT CAAGTGATGA GGGTGTTATT GATTCACTTT CAGAGGCAGT TCAGATTCTT
CAAAATGCTT CAACGTTTGA TGCTACGTTA GGCTCCTATG CAGAGTCTCT TTCAAGCGCA
CTTATAGAGA TTGAAGATGT TTCCTCAGAG CTTAGAAGCT ATGTTGGGTC TCTTGATTTT
GACGAAGAAG CCCTTGAAGA GATGCAAAGC CGTATGGCTC GTCTCCAAGG TCTTATGAGA
ACGTATGGTC CTGGTATGAA AGATGTATTT AAGAAATACC AGGCGGCTCA AAATCTTCTT
GAGGTTACAA GAGATACAAA AAAGCTTGTT CGTGAAGCAC AGGCAGAGGT TGATAGAGCA
AAAGATACTC TTAGCGTAAA GGCTAACGCG CTTAAAAAGG TTCGTGTCGC TGCGGCTCCA
AAATTGTGTG ATGCAGTTAA TCTGCAAATG AGTCATTTGC AGATGGGTTC AGCTCAGATT
GAATTGAATT TTGAAGATCT TCCTTTTGAG CAGTGGAATA AAGTCGGCTC TACAAAGATT
GAGCTTATGT ATAAGCCCTC AGCTCAGATG ACAGCTCGCC CTCTTAGAAA GATTGCTTCT
GGTGGTGAGG TTTCTCGCGT TATGCTTGCG TGCAAAGTGG TCCTTGGAGA GTCTGATGAC
TGCGATACGC TTGTATTTGA TGAAGTTGAT GCTGGCGTTG GCGGAACTAC TGCTGTTGCT
CTTGCAGAGG TTTTAGCGCA GCTTGCTAAA ACACATCAGG TGATTGTGGT AACTCATTTG
CCACAAGTTG CTGTTCTGGC TTCAAAACAC TATGTAGTGT CTAAGACAGA AGAACATAAC
GCCCTTCCTA TAACCTCGCT TACAGAGGTT TCTGGTACTC AGAGAGAAGA AGAGATTGCA
CGTATGCTAT CAGGCTCAAT AACTGAGGCT TCTTTGGCTC ACGCGCATGA ACTACTCACA
GAAACTTACT AG
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| Protein sequence | MLDELRVQNV ALIDDASFAP ASGLTVLTGE TGAGKTALLS SIKLLVGERA DASAVREGTD
ALRVEARFFT SSEDQEGIVV SRKVSADGRG RVEIDGHMAS VKELAGGIGT SIDLCGQHEH
QRLLDVKNHV SMLDAWIGPD IQSYQAEYKD ALHAYYVAIA ELQRVIEVSQ SSNAKIDEAS
FLVQKIDEVS PKEGELEDLE EQLPRFEHAE ALLQAAGGTH ELLSSDEGVI DSLSEAVQIL
QNASTFDATL GSYAESLSSA LIEIEDVSSE LRSYVGSLDF DEEALEEMQS RMARLQGLMR
TYGPGMKDVF KKYQAAQNLL EVTRDTKKLV REAQAEVDRA KDTLSVKANA LKKVRVAAAP
KLCDAVNLQM SHLQMGSAQI ELNFEDLPFE QWNKVGSTKI ELMYKPSAQM TARPLRKIAS
GGEVSRVMLA CKVVLGESDD CDTLVFDEVD AGVGGTTAVA LAEVLAQLAK THQVIVVTHL
PQVAVLASKH YVVSKTEEHN ALPITSLTEV SGTQREEEIA RMLSGSITEA SLAHAHELLT
ETY
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