| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0461 |
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| Symbol | |
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| ID | 8413310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 530685 |
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| End bp | 531233 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645022029 |
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| Product | Shikimate kinase |
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| Protein accession | YP_003179483 |
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| Protein GI | 257784266 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.196484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGTTTC GCGATTCAAG ATACGTCGTA CATGAGGGCT GTGATCATAT CTTTTTTGTC
GGCTTTCTGG GTGCCGGAAA GTCCACACTC GCACGCAATT TAGGAGAGCT ATTTCATCGT
CGCTATGTCG ATACCGATCG CCTAGCAGAA CGTATAGCAG GTAAATCACT GGCAGAAATT
TATGAAAATG ATGGCGAGGA GCTCTTTAGA CAGGCAGAAA CTGAGGTTTT ACACACGCTC
AAGTCTAAGA AGTCACTGCT GGTAAGCTGT GGCGGTGGAA TTGTCGAGAA GGACATTAAT
CTTGCGCTTA TGCGTGAGAT GGGAGTCATT GTGTTTCTCG ATGGCGATCT TTCTGATTCG
CTTCGTCAAA TTCAGCGCAC TGATAGACGT CCTGATTTGG GAAGCGTCGA AAACGCTACT
CAGCTTTATA GACGCCTGCG TCCACGTTAT GAGGCCGCCG CTGATATTAC TATTGACATT
CGTGAGAAAA CATTTGAGCA GGTTGCCATT GACTCTGGCA AGCTACTTTG GGAAAGAGGG
CTTTTATGA
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| Protein sequence | MEFRDSRYVV HEGCDHIFFV GFLGAGKSTL ARNLGELFHR RYVDTDRLAE RIAGKSLAEI
YENDGEELFR QAETEVLHTL KSKKSLLVSC GGGIVEKDIN LALMREMGVI VFLDGDLSDS
LRQIQRTDRR PDLGSVENAT QLYRRLRPRY EAAADITIDI REKTFEQVAI DSGKLLWERG
LL
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