| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0455 |
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| Symbol | |
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| ID | 8413304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 523422 |
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| End bp | 524276 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022023 |
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| Product | RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily |
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| Protein accession | YP_003179477 |
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| Protein GI | 257784260 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.333404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTAAAC CTGAAGCAAA CGAGGCAGTA CAGGCATCTG CAGAAGAGCA GAAAGCCGCA
AGAAGAGCTG CTCGTCGTGC TTCTAAAGGT ATCCCCGCCT GGGATAAAGA TAGAACACGC
CAGCTCTTTG CCCAATATAA AGAAACAAAA GATTCTGAGG TAAGAGACCA GCTTATTGTG
AGCCACTTAA ACCTCGTGCG CTTTTTGGCC TCCAAGTTCA AAAATCGTGG AGAACCCCTT
GATGATTTGA TTCAGGTGGG AACCATTGGA CTTATTAAGG CAATTGATAG GTTTGAGCCT
GATCGCGGTC TTGAATTTAC TACATATGCA ACACCTACTA TCATGGGAGA GATTAAGCGT
CACTTCCGCG ATAAAGGCTG GTCAGTGCGT GTCCCTCGTC GCCTGCAAGA GCTTTCTTCT
AAGATTAATC AGGTTACTGA TGACTTAACT AAAGAACTAC AAAGAAGCCC TTCAATTGAA
GAGATTGCTC AGCGCCTTGA TACTAACGTT GAAGAGATTC TTGAGGCTAT GGAGTCTTCC
AGTGCTTATA GCTCTGTTCC TCTTGAGGGA GGCGGCTCTG GCGCTGACGG AGATGAGACA
CCCTCTATCA TTGATCAGTA TGTGACCGAA GATGAAGATC TTGCTGGTTC TGATGATCGC
ATTGTTCTTG ATGAGGCCAT TAGAGACTTC TCACCACGGG AGCAAGAGAT TATTCGTATG
CGTTTTGTTG AAGGTCTTAC TCAGGTAGAG ATTGCAGAGA AACTTAATAT TTCCCAGGTA
CAGGTTTCAA GACTGCTTCG TCGTACTTTA AAGCGTATTC AAGAAAAGAT TGACCCAGAA
AGCGTGAATC GTTAA
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| Protein sequence | MPKPEANEAV QASAEEQKAA RRAARRASKG IPAWDKDRTR QLFAQYKETK DSEVRDQLIV
SHLNLVRFLA SKFKNRGEPL DDLIQVGTIG LIKAIDRFEP DRGLEFTTYA TPTIMGEIKR
HFRDKGWSVR VPRRLQELSS KINQVTDDLT KELQRSPSIE EIAQRLDTNV EEILEAMESS
SAYSSVPLEG GGSGADGDET PSIIDQYVTE DEDLAGSDDR IVLDEAIRDF SPREQEIIRM
RFVEGLTQVE IAEKLNISQV QVSRLLRRTL KRIQEKIDPE SVNR
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