Gene Apar_0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0454 
Symbol 
ID8413303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp523046 
End bp523429 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content43% 
IMG OID645022022 
Producthypothetical protein 
Protein accessionYP_003179476 
Protein GI257784259 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.290842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAA AAATTGTTGA GCTTTCCGCT CCAGCAGATC CAACGTTTGC TCGTTCAGTC 
AGAATGATGG CTGCTAACCT TGCTGTTCTA TGTAAGATGA ATGTTGACGA GCTTGAAGAC
GTCAAAATGG CCGCTGAAGA AGGTTTTGTT TTTGCATGCG GTACTCAGAG GGACTTCGTA
GATATTACGT TTACCCTTGA AGACAATACT ATGGAAATTG ATTTTGATTT GGGTGACGAG
GATCCAGTTG AGTCTGAGAC GGATAATTCC CAGCCACTTG AGCTTGTAGA GTTATTGCTT
TCCGCTATAT GTGACGAGTT TGCGCTTAGT GATGACGGTT ATACACTTCA TCTTGTAAAG
ATTTCTGGCG GTGCACATGC CTAA
 
Protein sequence
MAQKIVELSA PADPTFARSV RMMAANLAVL CKMNVDELED VKMAAEEGFV FACGTQRDFV 
DITFTLEDNT MEIDFDLGDE DPVESETDNS QPLELVELLL SAICDEFALS DDGYTLHLVK
ISGGAHA