| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0449 |
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| Symbol | |
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| ID | 8413298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 517328 |
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| End bp | 518323 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 645022017 |
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| Product | 2-keto-3-deoxygluconate permease |
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| Protein accession | YP_003179471 |
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| Protein GI | 257784254 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00793] 2-keto-3-deoxygluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCTG AACAGCAGAA AGCAACTCGT AAAATTGGTG TCCCCAGGTT CCCCGGCGAT
ATTATGCTTT ATCCGCTTTC TGTGGGCCTG TTGCTCCATT CTTTTTTCCC ACAGGTTTTA
GAAATTGGTA GTTTTACTAC GGCTGTTGCT AAGGGCGCTC CTGCTATTGT TGGTATTGTT
TTACTGTTTG TTGGCGCTTC TATTGATCTT AAGACTGTTC CCAAGGTTCT GAAAACTGGT
CTGACCATCC TGATTCCTAA GCTTGCTATT GCTATTGCCT TTGGTCTCTT TGTTGCTAAA
TTTATGGACG ACAATTTCTT TGGTCTTAAT GCACTTTCTA TTATTGGTGG CATTACTTTT
TGTAATGTTG CCCTGTACAT TGGTATTACA GCTGAGTATG GTACTCCTGA TGAGCAGGGT
GCTGCTGCAG TTTTATCTCT TGTTGCTGGT CCTGCAGTTA CCATGATTGC TCTAGGCGCA
GCGGGTGTTG CAGCAATTTC TCCTACCGCA CTTATTGGCA CACTGCTTCC TCTTGTTCTT
GGTGTTGTTC TTGGTAACCT TAGTCCATTT ATCAGGTCAC TTTTGGTTCC AGGCATTAAC
CCTTGTATTG CTGTTGTTGG TTTTGCCCTT GGCTGCGGCA TGAGTGTTGA GAATCTTATT
ACTGGCGGTC TATCAGGTAT TCTTTTAGCA GTTCTTTGTA TCATCGCAGG TATTCTTACC
ATGCTTGTTG AACGTCTTCT TGGCGGTTCT GGTAAGGCAA GTCTTGCTAG TGCAACTATT
GCAGGTACCG CAACAACCAC ACCTGCTGCG GTTGCTGCTG TTGATCCAAC CTACACTGCT
CAGGTTGTTG CTAACGCAAA CGCTCAGCTT GCAGCTGCTG TAGTTATTAC TGCACTGGTA
GCTCCTGCAT TCACTGGTTG GCTTGATAAG AAGTTGGCAA AGAAAAATGA TGACGCCGAG
ATGCAGACTT CAGAAGAAGT ACCTGCTACT GAGTAA
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| Protein sequence | MAAEQQKATR KIGVPRFPGD IMLYPLSVGL LLHSFFPQVL EIGSFTTAVA KGAPAIVGIV
LLFVGASIDL KTVPKVLKTG LTILIPKLAI AIAFGLFVAK FMDDNFFGLN ALSIIGGITF
CNVALYIGIT AEYGTPDEQG AAAVLSLVAG PAVTMIALGA AGVAAISPTA LIGTLLPLVL
GVVLGNLSPF IRSLLVPGIN PCIAVVGFAL GCGMSVENLI TGGLSGILLA VLCIIAGILT
MLVERLLGGS GKASLASATI AGTATTTPAA VAAVDPTYTA QVVANANAQL AAAVVITALV
APAFTGWLDK KLAKKNDDAE MQTSEEVPAT E
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