| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0437 |
|---|
| Symbol | |
|---|
| ID | 8413286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | + |
|---|
| Start bp | 505293 |
|---|
| End bp | 506078 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 645022005 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003179459 |
|---|
| Protein GI | 257784242 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA TTACTTCATA TGTTTATCCT GCTATTTGTA TAGCATTGAC TTCCTTATCT
AGTTACGGCT CTATTTTAGC TTTTTGCATC CAATTTTTTA TTGAACCTAT TTTTTCATAT
CTATATTTTA TTCTGTTCGG TATGCAGCTT TCTGCTTCAA GTATGTCATT GCTTATAGGA
ATTTTAACCT TATCGTCATG GCTTTCTGCA ATGCAATGTT CGGCCAATAT TATTGTTCAA
GATCGATTTG CAAAAACAAT TTTTATGTAT TTAATTTCTC AAAATCATGC AATAGTATTC
TTTTTAATTA GGTACATAAC AATTACCGTT ATTTGTTTTA TGAGTTCTTT TTTAACTTCA
GTTATTGTTC TTTATATTGC AGGTGCTGAT GTTCTGGCCC TTCTTTTTCC TTTATGTATA
TCCCTTATTC TTGCTTCTCT TGGTGGTGCT ATATTTGGAG TATTTTCTTC AGTAATTGGT
CTATTGTTTA CTGATGGATT TGCTGTACTA AATCTATTAT CAATAAGTAT TCCCATACTT
TCTGGAGCTG TCATACCACT TTATTTATTT CCAAGCTCTT TGATTTCTAT CTGTAAGTGT
ATTCCCATTT CATGGATTGT TGATGGTGTC GGATTATTTT TGAGTTCTAA TACAAATGAT
GCGTTTCTAT TGTGTGGTTA TGCGTTGTTC CTAGAATTTC TATGGATATT GATAACGCTT
GCTTTTATCT CTTTTTGCAA CAGCAGGCAG AGAATCACTG GGCAAATAGA GGGGATGCAT
TTGTAA
|
|---|
| Protein sequence | MKRITSYVYP AICIALTSLS SYGSILAFCI QFFIEPIFSY LYFILFGMQL SASSMSLLIG
ILTLSSWLSA MQCSANIIVQ DRFAKTIFMY LISQNHAIVF FLIRYITITV ICFMSSFLTS
VIVLYIAGAD VLALLFPLCI SLILASLGGA IFGVFSSVIG LLFTDGFAVL NLLSISIPIL
SGAVIPLYLF PSSLISICKC IPISWIVDGV GLFLSSNTND AFLLCGYALF LEFLWILITL
AFISFCNSRQ RITGQIEGMH L
|
|---|
| |