| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0429 |
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| Symbol | |
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| ID | 8413278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 496355 |
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| End bp | 497206 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645021997 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_003179451 |
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| Protein GI | 257784234 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCTT CATTTGCAAC TACAGTTAAA AAGACTGCTC TGAAGGGCGT TGCAGTTGTT
TCTATGGCGT GTGCACTTAT GGGCCTTATA GCTTGCTCAT CACCTAAACA AGAAACTGCT
CAGCAGAGCA CAACTTCACA GTCCGAGTCT GGCTATACAT TGGTAACTAA GGGTCATCTG
ACTGTTGTCG CAGAACTTGG TTTCCAACCT TTTGAGTATT TTGAAGGTAA TTCAACCACT
CCTGTTGGCT TTGACGTTGA TCTTATTACT GAGATTGCTA AGAGACTCAA CCTCGAAGTT
ACTTACCTGC CAAATCAGAA GTTTGACACC CTTGTTCCAA CTATTAAACA GGGCGGTAAG
GCAGATGTTG CTATTGCAGG TATTACCATC ACTGATGAGC GTTCCCAGGA AGTAGACTTC
ACTACTTCTT ACCTTGACTC TAATCAGTCC CTTGTTGTTA AGTCTGGCAG TACCGAGACT
GAGCAGACGC TCAATGATGC CTCCAAGAAG ATTGTTGTTC AGACAGGAAC TTCTGGTGAG
GATTGGGCTA AAGAGAACCT TCCAAATGCA ACTATTGTTT CTGTAGACGA CGTTGCTGCA
GCAATGGCAG GAGTCCAGAC TGGTCTGTAT GACGCGATGG TCATTGATCT GCCTGTTGCT
TCTAATTTGA TTAGCACTTC ATATTCTGAT CTGACAATTG CAAAAGAGAT TCCAACAGGT
GAGCAGTACG GCATTGCCGT TTCCAAGGAC AATCCTGCAC TGACTGAAGC AATTAACAAG
GTTCTCGCAG ATATGGAAAA AGATGGCACT ATGACTGCTC TTAAAACCAA ATGGTTTGGC
TCTAATATCT AG
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| Protein sequence | MKSSFATTVK KTALKGVAVV SMACALMGLI ACSSPKQETA QQSTTSQSES GYTLVTKGHL
TVVAELGFQP FEYFEGNSTT PVGFDVDLIT EIAKRLNLEV TYLPNQKFDT LVPTIKQGGK
ADVAIAGITI TDERSQEVDF TTSYLDSNQS LVVKSGSTET EQTLNDASKK IVVQTGTSGE
DWAKENLPNA TIVSVDDVAA AMAGVQTGLY DAMVIDLPVA SNLISTSYSD LTIAKEIPTG
EQYGIAVSKD NPALTEAINK VLADMEKDGT MTALKTKWFG SNI
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