| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0408 |
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| Symbol | |
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| ID | 8413257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 471129 |
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| End bp | 472562 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 645021976 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_003179430 |
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| Protein GI | 257784213 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGAAC TAATAGTACT AAGTGCCTTT GCGGTGATGC TCATCGTAGG CACAGTCCTA
TCCTTCCCCC TAACATCTAT CTTGACCGCT GGTTTCTTCC TCTTTTTTGG TTACGGACTT
TCACGCAAAA TTTCTCCAAA AAAGCTCCTT ATGGCTGCCT TTAAATCTGT CTGGGAAGTC
AAAACAATCA TTGCGCTGTT TGCTGTTGTA GGTGCTATGA GCGCTGCGTG GCGTGCAGCT
GGAACTATTC CAGAGATTGT CAGTATCTCT GCTTCTCTTA TTTCTCCATC TATTTTTATT
CTGGCAACAT TCTTACTCTG CACCATGATG TCCATGCTTC TGGGTACCGC ATTTGGTACC
GCAGCAACCA TGGGAATCAT CTGCATGTCT ATTGGTAAAG CAATTGGAGC AAGCGAGTTC
TTTATTGGTG GTGCAGTTCT TGCAGGCAGC TACTTTGGTG ATCGCTGCTC CCCTATGTCT
ACCAGCGCAA TTCTGGTTTC ACAGCTTACC GATACCAATC TATCTAAGAA TATTAACCGC
ATGCTTCGTA CCAGCGTGGT GCCTTTTATT GTGGCATGCG TCATCTACGT AGCCTGGGAC
TTCTTCATGG CAAATACGGG AACCATTCCT GATGTCACCG GTCTTCTAAG CCGTTCCTTT
AGGCTCTCTT TGATTTCACT TACACCAGCA CTTCTTGTTA TTGTTTTCTC GCTTCTTAAA
GTTGATGTCA TTGTTACCAT GACATCCAGC CTGGTACTCG CCTGCATTCT GTGCGTCACA
ATTCAACGCG TCCCTCTTGC CGACCTGCCT ATCATTCTGC TTTTTGGCCT TCGTGCTCCA
GGTGCTACCG TAGCAAACAT GGTCAACGGT GGCGGCATTT TCTCTATGAC AAATGTTTTG
ATGATTGTCA CCATTTCTTC AAGCTATGCT GGTCTTTTCC AGACAACTGG CCTGCTTCGC
CGTATGTGTC AGCTGGTAGC TGATCTCTCC GATAGCTCTA CGCCTTTCTT TGGCGTTCTG
ATTACCAGCA TGTTTACCTC AATGGTTTCT TGTAACCAGA CCTTGGCCAT TATGCTGACA
AATGACCTGT GCGAGAACGC AGAAAACTCC TCCAGTGCAC TTGCTCTGGA TATCGAGAAT
AGCGCTGTAA TCCTTGCTCC ACTGGTTCCG TGGTCCATCT CAAATATCTC GGTACTCTCT
GCAATTGGTG CACCTTCTAT GAGTCTTTTA GCTGCAAGTT TCCTCTATTT ATTACCTCTT
TGGACTCTGG GAATTTCTCT GTGGCTCCAT CGCCGTCCAG CAAAGATTGA TGGTCATCGT
GCCCGTTGGC TTGGCCTTAC CTCTGATGAT GTCCGTAGTT GCACATGGCC ACGCGTACAG
GAGACAGAAT CAGCAGACTC CGTCGAGAGC CTTCCTGCTG CAAAAGTTGC TTAA
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| Protein sequence | MVELIVLSAF AVMLIVGTVL SFPLTSILTA GFFLFFGYGL SRKISPKKLL MAAFKSVWEV
KTIIALFAVV GAMSAAWRAA GTIPEIVSIS ASLISPSIFI LATFLLCTMM SMLLGTAFGT
AATMGIICMS IGKAIGASEF FIGGAVLAGS YFGDRCSPMS TSAILVSQLT DTNLSKNINR
MLRTSVVPFI VACVIYVAWD FFMANTGTIP DVTGLLSRSF RLSLISLTPA LLVIVFSLLK
VDVIVTMTSS LVLACILCVT IQRVPLADLP IILLFGLRAP GATVANMVNG GGIFSMTNVL
MIVTISSSYA GLFQTTGLLR RMCQLVADLS DSSTPFFGVL ITSMFTSMVS CNQTLAIMLT
NDLCENAENS SSALALDIEN SAVILAPLVP WSISNISVLS AIGAPSMSLL AASFLYLLPL
WTLGISLWLH RRPAKIDGHR ARWLGLTSDD VRSCTWPRVQ ETESADSVES LPAAKVA
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