Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apar_0387 |
Symbol | |
ID | 8413236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Atopobium parvulum DSM 20469 |
Kingdom | Bacteria |
Replicon accession | NC_013203 |
Strand | + |
Start bp | 449752 |
End bp | 450447 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 645021955 |
Product | hypothetical protein |
Protein accession | YP_003179409 |
Protein GI | 257784192 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCT TCAAGCGTTT TTGCTACATA CTCTATGTTT TAGCAAGTGT ATTTGTGTTT TTAGCTCTTG CATTGACGTG GTTTGGTTCT TGGACTCATC AGGCAACCAG CCTCTTGTTT ACCAAGCCAT ACCTTATTGC TCTTAACGTT TGTGCAGCTA TTAGTATCTT TGGTCTTATT GTGGTTCTGT TTAGAGCTCT ATTCATTAGA AAGACTGTAA AACTTATTGT TGCAACTGTT GAGGGCGGAA CAATTTCCGT TACTAAAGAC GCTATTTCTT CCCAAGCAGC ACATATCATT GAAGAAGACG GAACTTGCCT TGCGCACCGT GTTAACGTGA AGATTTCTAA GAATAATTCT GTATCTGTAC AGGTTGATAT TCTTCCTAAA GAGCCTGTCG ATGTCACCGC AAAGGGTTCT GAGTTCTATA GCGCTCTTCA GTCTGGTCTT GCTATTGTGT GTGGACCTTG TGTTTCTGAC ATTAATCTCT CTTTTATTAA GCCAAGTTCC TTCTCGCCAA AAGATGAAGA AGGTACGTCT CTACTTCAGT CAAAAGATGT TGTAGCAAAA TCAGAGATTG TAGAAGAGCA AGCTTGTGAC CAACTTTCTG AACAGGCCTC TGCACAGCAG ACTGGTAAAG ACATTCGGTT GAGCATTTCA GAGCCAGAGG CAAAGGAGGT CAAAGATAAT GGATAA
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Protein sequence | MSGFKRFCYI LYVLASVFVF LALALTWFGS WTHQATSLLF TKPYLIALNV CAAISIFGLI VVLFRALFIR KTVKLIVATV EGGTISVTKD AISSQAAHII EEDGTCLAHR VNVKISKNNS VSVQVDILPK EPVDVTAKGS EFYSALQSGL AIVCGPCVSD INLSFIKPSS FSPKDEEGTS LLQSKDVVAK SEIVEEQACD QLSEQASAQQ TGKDIRLSIS EPEAKEVKDN G
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