Gene Apar_0387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0387 
Symbol 
ID8413236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp449752 
End bp450447 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content41% 
IMG OID645021955 
Producthypothetical protein 
Protein accessionYP_003179409 
Protein GI257784192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCT TCAAGCGTTT TTGCTACATA CTCTATGTTT TAGCAAGTGT ATTTGTGTTT 
TTAGCTCTTG CATTGACGTG GTTTGGTTCT TGGACTCATC AGGCAACCAG CCTCTTGTTT
ACCAAGCCAT ACCTTATTGC TCTTAACGTT TGTGCAGCTA TTAGTATCTT TGGTCTTATT
GTGGTTCTGT TTAGAGCTCT ATTCATTAGA AAGACTGTAA AACTTATTGT TGCAACTGTT
GAGGGCGGAA CAATTTCCGT TACTAAAGAC GCTATTTCTT CCCAAGCAGC ACATATCATT
GAAGAAGACG GAACTTGCCT TGCGCACCGT GTTAACGTGA AGATTTCTAA GAATAATTCT
GTATCTGTAC AGGTTGATAT TCTTCCTAAA GAGCCTGTCG ATGTCACCGC AAAGGGTTCT
GAGTTCTATA GCGCTCTTCA GTCTGGTCTT GCTATTGTGT GTGGACCTTG TGTTTCTGAC
ATTAATCTCT CTTTTATTAA GCCAAGTTCC TTCTCGCCAA AAGATGAAGA AGGTACGTCT
CTACTTCAGT CAAAAGATGT TGTAGCAAAA TCAGAGATTG TAGAAGAGCA AGCTTGTGAC
CAACTTTCTG AACAGGCCTC TGCACAGCAG ACTGGTAAAG ACATTCGGTT GAGCATTTCA
GAGCCAGAGG CAAAGGAGGT CAAAGATAAT GGATAA
 
Protein sequence
MSGFKRFCYI LYVLASVFVF LALALTWFGS WTHQATSLLF TKPYLIALNV CAAISIFGLI 
VVLFRALFIR KTVKLIVATV EGGTISVTKD AISSQAAHII EEDGTCLAHR VNVKISKNNS
VSVQVDILPK EPVDVTAKGS EFYSALQSGL AIVCGPCVSD INLSFIKPSS FSPKDEEGTS
LLQSKDVVAK SEIVEEQACD QLSEQASAQQ TGKDIRLSIS EPEAKEVKDN G