| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0386 |
|---|
| Symbol | |
|---|
| ID | 8413235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | + |
|---|
| Start bp | 449008 |
|---|
| End bp | 449628 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 645021954 |
|---|
| Product | protein of unknown function DUF47 |
|---|
| Protein accession | YP_003179408 |
|---|
| Protein GI | 257784191 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGGTA AGCCAAAAGA GGACGTCTTC TACACCATGT TTCGTGAGTT TGGCGACAAA
ATTGTAGAAA CCGCTGAAGA GTACGCGGTC ATTATGGAAG GCTATCCTGA GACTGCTGCA
CGTATTCCTC AGATGAAGGT TTATGAGCGT GAGTGTGACG AGAAGGTCCA GCACATTATG
AAAGAGCTTT ACGCGTCCTT CGTTACTCCC TTTGAGCGTG AAGACATCTC AGATTTGGCA
CTTCGTCTTG ACGACATTGT TGACGGAATG AACTCTGTTG CAGAGCGTCT TGATCTCTTT
AACGTTGACG ACACTCGTAA AGAGGCCATG CAGCTTGCTG AGCTTACTCT TCGCGCATGC
AAAACGGTTC AGGAGATGCT GAGTATTCTG AGCGATTACA AAAAAGATCC TACCGTTATG
GAGAAGGCCA TTGCTGTTGG ACACGTTGAG GACGAGGGTG ACCTTATTTA CCACAATGCT
CTCTCTCGTT TGTTCCGCGA TGAGATGCCT GGCCGTCACA CTGTTGCTTG GCTTCGTATT
TTTGATCGTA TGGAGACAGT TTTAGATTCT TGTGACGATG CAGCAGGAGT TGTTCGCTCT
GTTGTTATGA AGAATGCCTA A
|
|---|
| Protein sequence | MLGKPKEDVF YTMFREFGDK IVETAEEYAV IMEGYPETAA RIPQMKVYER ECDEKVQHIM
KELYASFVTP FEREDISDLA LRLDDIVDGM NSVAERLDLF NVDDTRKEAM QLAELTLRAC
KTVQEMLSIL SDYKKDPTVM EKAIAVGHVE DEGDLIYHNA LSRLFRDEMP GRHTVAWLRI
FDRMETVLDS CDDAAGVVRS VVMKNA
|
|---|
| |