| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0384 |
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| Symbol | |
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| ID | 8413233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 447050 |
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| End bp | 447748 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645021952 |
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| Product | Adenosylhomocysteine nucleosidase |
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| Protein accession | YP_003179406 |
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| Protein GI | 257784189 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.799751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATTG GAATTATTGG AGCCATGGAA CCAGAGATTG CATTGCTAAA AGAGCAGATG
ACTATTGAGC GCACTTATGA GCAGGCTCAT ATGCAATTTG TTGAAGGTCT TTTGGGAGAA
GTTCCTGTAG TTGTTGTTCA GTCGGGGATC GGCAAGGTCA ACGCTGCGGC ATGTACACAG
ATTCTGATTG ATACGTTTGC TGTAACGCAT GTTATAAATA CTGGTATTGC AGGACTTCTT
AGTCCTGAAC TGCAGGTAGG GGATATTGTT ATTTCTTCTG ATTTAGTTCA ACACGACATG
AACGTTGGTC CTCTTAATTA TGCAGCTGGT CAAATCCCGG GTCTTCCGGT TTTCTCGTTT
AAAGCAGATG AGAGTCTTGT TGAGCATGCT CTTACGTCAG TGCAGGAAGT AGCTCCTGAG
TTGCAGGTTA TTTCTGGTCG TGTTGCCTCA GGAGATCAGT TTGTAAGTTC ATCAGAACTT
GCTGACCACA TTTACACAAC GTTTGGTGCT GATTGCTGCG AGATGGAAGG CGCTTCAATT
GCTCAGGTTG CTTGGCTTAA CCATACGCCT TTTGTAGTAA TTAGACTCAT GTCTGATAAG
CCCGGCACTA CTTCAAGTGT TGATTATTTG ACGTTTGAGC GTGAGTCGTC TGAGCGTTCT
GCTCAAATTA CTGCGGCTAT CATCAAGAAG CTTTCTTAA
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| Protein sequence | MKIGIIGAME PEIALLKEQM TIERTYEQAH MQFVEGLLGE VPVVVVQSGI GKVNAAACTQ
ILIDTFAVTH VINTGIAGLL SPELQVGDIV ISSDLVQHDM NVGPLNYAAG QIPGLPVFSF
KADESLVEHA LTSVQEVAPE LQVISGRVAS GDQFVSSSEL ADHIYTTFGA DCCEMEGASI
AQVAWLNHTP FVVIRLMSDK PGTTSSVDYL TFERESSERS AQITAAIIKK LS
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