| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0379 |
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| Symbol | |
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| ID | 8413228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | + |
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| Start bp | 440259 |
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| End bp | 441224 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645021947 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_003179401 |
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| Protein GI | 257784184 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.234172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAGCCCT CTAAAATCAC AGACGGTGCA AAGACTGCAG TAGAAGATGA AGTACTTGGC
AGCGATGATG CTGAAATAAC ACCTGATAAC AAAAAGAAAA TTTACCGAGG AATGTTGTTT
GTCCTGATTG GAGGGGCTTC CTGGGGTGCA TTTGGAACAG CTGCAAAATA TCTGTTAGAT
ACCTATCACG TTGATCCGAT GTGGTTGATT GATATTCGTG AGCTTTGTGC CTGCTGGTTA
TTCTTGGGAA CTGCTTTTGC GTTTGATAGA AAAAATCTCA TGACCGTTAT TAGGCAGCCA
AAAGAGCTGG CAAAGATTTT TGTGGTTAGT TTGTTTGCTA TTCTTTTCTC TCAAGTTGCT
TATATTTATG CAGTTAATGC TACTAATTCT GGAACTGCAA CCATCATGCA GTCGTTGGGC
ATGTTGGGCG TTTTGGCCTT TGTCTGCGTG GTTGGCAGGC GTTGGCCTCG ACGCCGTGAG
ATTCTTGGCA TTGTTTTGGC GCTTATTGGC ACCTATCTTT TGGTAACAGG AGGAAATCCT
GGCAAGCTCA ACCTGCCAAC TGCAGGTATT TTCTGGGGTG TTATGTGTGC TTTTGCTCAG
GCAGCTCTTT CTATTTTACC CAAGCCTCTG ATGGAGAAGT GGGGTAGCTT TACTGTTAAC
GGATTAGCGT TTCTGTTTTC TGGCATGCTT ATTGCCGTGT TTTATCAGCC TTGGAATCAT
ATGCCTCAAC TGGACGCCTT TGGCGTCTTG CTCGTAGTTA TTGGTGTGTT TGTGGGAACC
TTTTTGGCGT ACGGCCTCTA CCTGCAGGGC GTTAAGGATG CAGGTTCGCT CAGAGCTGTC
CTTCTTGGTA CTGTCGAGCC CCTTATGGCA ACTATTACCA CGGTATTGGT GCTTGGAACC
ACCTTTAGCA TCGCCGACCT TATCGGTTTT GCTCTCATTC TTGCGATGGT CGTGCTCACC
GCTTAG
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| Protein sequence | MEPSKITDGA KTAVEDEVLG SDDAEITPDN KKKIYRGMLF VLIGGASWGA FGTAAKYLLD
TYHVDPMWLI DIRELCACWL FLGTAFAFDR KNLMTVIRQP KELAKIFVVS LFAILFSQVA
YIYAVNATNS GTATIMQSLG MLGVLAFVCV VGRRWPRRRE ILGIVLALIG TYLLVTGGNP
GKLNLPTAGI FWGVMCAFAQ AALSILPKPL MEKWGSFTVN GLAFLFSGML IAVFYQPWNH
MPQLDAFGVL LVVIGVFVGT FLAYGLYLQG VKDAGSLRAV LLGTVEPLMA TITTVLVLGT
TFSIADLIGF ALILAMVVLT A
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