| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0366 |
|---|
| Symbol | |
|---|
| ID | 8413215 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | - |
|---|
| Start bp | 420144 |
|---|
| End bp | 421031 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 645021934 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003179388 |
|---|
| Protein GI | 257784171 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAT TGTTCAAGGC TGAATTTAAG CGACAGCTTA CCAATAATCC ATTATTTTGG
ATATGTATTG CAATTGGCGC CTGTATTGCA ATACTTGCCG CTTGGATTGA AATACAAATT
GAATTAAATA CCTTAGAGGC AACTCTTCAA CAGGGAGATC ATCTTTCCTA TAACACTTTG
CTTTCTGTCA TTTCTACTTA TACTGCTTGG ATTCCAACAC GAATCGGAGA TTTTTACAGT
GGACTGTACT ATCTCTTATG GCCACTCTTA GCAACCATCC CAACCGCTTG GATTTTAAGC
AACGATTCAA AAGAAGGAGT GCTTGAACAG CAATGTCTTA GAATTAAAAA AGCTAGTGTT
ATCAGGATAA AACTATATGT AAGCTTTGTT TCTGGAGGTA TTTGCTCTGC CTTACCTCTT
GTCCTAAATT TTTTAGCTGT AATCTGTTTC TTACCGTTAT CTACACCAAA AATTTACGAT
GAGATATATA CCGCTGTTCC TATGAACTCT CTATTCTCAG GACTTTTTTA TAACTCTCCT
CTTGCTTATG TCATTACCCT ATCCGCATTA GCCTTCATAA TTGGAGGGCT GTTTTCCTGC
ACTGTTTCTC TTTTTGCAAG TTTAACCAAG ACCACATTCC AAGCAATTTT TGTTTCTTAT
TTTCTGCTTC ACCTATTAGC GTTCTTAGGC TCACAATTTT CAGCAATCCT CTCCTCTGCT
CAATTAAGAG AAGTCGGGCA AAATTCTTTT ATTAAGTTGA ATTTCTTTCA ATTAACAAGT
TCCGAATATG CTCCAACAAA ACTTGGATTT TATTGCTTCT GTTTTGTTTT GCTATTTCTA
GTAATCTTCA TTTCTTACAA AAAGACTTGT AGAAGTGATC TGCTATGA
|
|---|
| Protein sequence | MNSLFKAEFK RQLTNNPLFW ICIAIGACIA ILAAWIEIQI ELNTLEATLQ QGDHLSYNTL
LSVISTYTAW IPTRIGDFYS GLYYLLWPLL ATIPTAWILS NDSKEGVLEQ QCLRIKKASV
IRIKLYVSFV SGGICSALPL VLNFLAVICF LPLSTPKIYD EIYTAVPMNS LFSGLFYNSP
LAYVITLSAL AFIIGGLFSC TVSLFASLTK TTFQAIFVSY FLLHLLAFLG SQFSAILSSA
QLREVGQNSF IKLNFFQLTS SEYAPTKLGF YCFCFVLLFL VIFISYKKTC RSDLL
|
|---|
| |