| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0360 |
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| Symbol | |
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| ID | 8413209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Atopobium parvulum DSM 20469 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013203 |
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| Strand | - |
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| Start bp | 414270 |
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| End bp | 416480 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645021928 |
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| Product | Superfamily I DNA and RNA helicase-like protein |
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| Protein accession | YP_003179382 |
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| Protein GI | 257784165 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCAA TCCACCAGCA AGAACAAGAG CACCTCACCC ACGTATATCA AAAACTTGTT
GAGATTCGTG AGGATTTGGA TACAACGCTC AACACCACGC AAAAAGATGC AGCTAGAGAC
CTTCGTCAGA TGAGTGAAGA AATCCGTCCA GACTTTGGCG GAGCGGACGA AACCATTGAG
ACCCTTGCGG CTATTGAGAC GCTCAACAGC GTTATTGATA CGTACAACCA ATACCACGAT
TTCACTGTCG AGAAACTCGG TCGAGTCGAA ATCCTCTTGA GGCAGCCTTA CTTTGCCAAG
GTCACGCTCA AGATGCGACC TGGCCGTCCT TCTCGCGATG TATACATTGG AGCAGCAGGC
ATCACGGACA AAGACCGCTC GCAACTCATT GTTGACTGGC GCAGCCCCGT TGCCGAGACA
TATTACAACC AAGAAATGGG AACTACGTCG TACCAGGTAG ACGGCAAGAA AAGAACGGTT
GAGCTGGAGC TTCGCCGACA ATTTGACATT ACGCGTGACA AGCTGAACCT CTACTTTGAT
ACAACGGTTG CCATTGAAGA TTCTCTGCTG CTTGCCGCCC TGAAGCGCCA GCACACCGAG
AAGCTGCAGG CCATCACCGC GACTATCCAG CGCGAACAAA ACGTTGTGGT CAGGCACGAG
GACGTGCCAG TTCTGCTGGT CAACGGTATT GCAGGATCGG GTAAAACGTC TGTTTTGCTG
CAGCGCATCG CGTACCTTCT GTACCAGCAG CGCACTACGC TGACCGCAGA TCAGGTGTAC
CTGTTCACTC CCAATGAGAT GTTTGGTCGC TACATCAATA CCGTTTTGCC CAGCATGGGC
GAGCACAATC CGCAGGTATT TACCTGGGAT TCTTTCCTCA AAGCATTGGG CCTTGCCGAC
CACGCATCGG GCGCTCACAA CAACCCCGAT TCTCTGAAGA AGCTTGAGGA GCAACTTGCC
TCGCTTGAGC TCTATGAGGA TGACTTCAAG GCCATCTCTG TTGAGGGAAC AACGCTTATT
AAGCCAGCTC AAGTGGCTAG TTCTGTAGCA AAGTTTTCGC AATTCCCTGT GGGACCACGC
CTCATTGCGC TTGCCAAAGA CGAGCTCCAC ATCCGCCTGG AGCGCAGGCT TGGCCAGATG
GCTCACAACG ACGAAATCCA AGAAGAGATG CTCTCCCTTG ACGTTGAGCA GCAGCTTGAG
GTCTTTGGCC GCACCATCAG CCCTTCCGAC GAGGAAGAAG TTCTAGCGCG CACCCGCGAG
TTCCTTAACT GGCGCTACTC CTCCGCTCAC GAGGTCATCG AGTCCACTTC CTGGCTCCGC
ATCGACCGCA TTGGTATGCG CATGCTCAAC ACCTCCGCAC TCAGTGGCGC CGAATGCGTT
TACCTGCGAC TCCTTATCAC AGGGGCTGGC GAGAAAAACG TCAAATTTGT CATGATTGAC
GAGGTCCAGG ACTATACCGA GACGCAGCTT ATGGTGCTTG GAAAGTACTT CTCGCGCGCG
CACTTCCTGC TTTTGGGTGA CTCCAACCAG GCAATTTGGG AAGACACCGC AACATTTGAG
CAGATTGAAA AAATCTTTAC CGCAACACAT GGCGAGGGCG CAGTTTCTAC CTGCAAGCTT
CTGATAAGCT ACCGATCTTC TCCCGAGATT ACCGCGCTCT TTACCTCGCT TTTAAGTGAA
GAAGGACGCG GCCAGACAAG CTCTGTTCAG CGTGGCGGCA AAAAGCCTGA GTTCTTTGAG
GTGGTAGCTG ACGATAAAGA GACTGAGCGC GCTGAGTACC TGAAGACGAT GAAGTCTCTT
GTTGAACAGG CGCAAGAGTT TGACGGCCTG ACCGCCATTG TGTGCACCGA AAAGTCTCGC
GTTCGTTGGC TGGCCAAGCA GATGGAAGAG CTGTTTGCTG CGGAAGATGT GAGCGGTGGC
ACTGACGATA CGGTGCAGAT CGACGGCATG AAATCAAGCG AGTCAAACAC TGGCGTCAAA
GTGCTCACCA GCCACGATTC CCTACCCGCG AAGGGCGTCG TACTTCTTGA CCTTGCGCTA
GCAAAAGGCC TTGAGTTTGA TCAGGTCATC GTTGCCGACG CACAAGAGGA AGTGTATAAA
GCAGACGGAA TTTCTCGCCG TAGGCTCTAT ACTGCGCTGT CGCGCGCGAT GCATCACGTG
ATTGTGGTCT CTCAAGGAAA GATGACTCCG CTGCTCAGCA ATTTGCTTTA A
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| Protein sequence | MDPIHQQEQE HLTHVYQKLV EIREDLDTTL NTTQKDAARD LRQMSEEIRP DFGGADETIE
TLAAIETLNS VIDTYNQYHD FTVEKLGRVE ILLRQPYFAK VTLKMRPGRP SRDVYIGAAG
ITDKDRSQLI VDWRSPVAET YYNQEMGTTS YQVDGKKRTV ELELRRQFDI TRDKLNLYFD
TTVAIEDSLL LAALKRQHTE KLQAITATIQ REQNVVVRHE DVPVLLVNGI AGSGKTSVLL
QRIAYLLYQQ RTTLTADQVY LFTPNEMFGR YINTVLPSMG EHNPQVFTWD SFLKALGLAD
HASGAHNNPD SLKKLEEQLA SLELYEDDFK AISVEGTTLI KPAQVASSVA KFSQFPVGPR
LIALAKDELH IRLERRLGQM AHNDEIQEEM LSLDVEQQLE VFGRTISPSD EEEVLARTRE
FLNWRYSSAH EVIESTSWLR IDRIGMRMLN TSALSGAECV YLRLLITGAG EKNVKFVMID
EVQDYTETQL MVLGKYFSRA HFLLLGDSNQ AIWEDTATFE QIEKIFTATH GEGAVSTCKL
LISYRSSPEI TALFTSLLSE EGRGQTSSVQ RGGKKPEFFE VVADDKETER AEYLKTMKSL
VEQAQEFDGL TAIVCTEKSR VRWLAKQMEE LFAAEDVSGG TDDTVQIDGM KSSESNTGVK
VLTSHDSLPA KGVVLLDLAL AKGLEFDQVI VADAQEEVYK ADGISRRRLY TALSRAMHHV
IVVSQGKMTP LLSNLL
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