| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0357 |
|---|
| Symbol | |
|---|
| ID | 8413206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | - |
|---|
| Start bp | 410361 |
|---|
| End bp | 411704 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 645021925 |
|---|
| Product | phosphofructokinase |
|---|
| Protein accession | YP_003179379 |
|---|
| Protein GI | 257784162 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0205] 6-phosphofructokinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGCA CATCAGAGCA CGCAATTCAC ACAATCCTGG TCGGACAGTC GGGCGGGCCA
ACCACGGCTA TCAACGCGTC GCTCGCGGGT ATTATTCGCG CAGCTCATGC CCAGGGACTT
CGCGTACTCG GAATGCGCAA TGGAATCCAA GGTTTTCTTG AGGGCAATGT CGTTGACCTG
ATTGAAGTAC TTGAGCTTGA GAAACCTAAA CTTGGAGCGC TCAAGCAAGC CGATACAAAT
CTTGGCGAGA AAAACCTTCA GCTTCTCAGA AAAACGCCAT CGAGCTGGCT GGGCAGCTGC
CGCTTTAAGC TGCCAGAGCT TGAAGCTAAT TCTACGTCTG GTGCCAGCTC TGAATCTACT
GCAAACTCCA AATCCGCAGC CGTCTCCCCT ATCTACCAGC AGATTGATTT ACAGCTCAAG
AAATACCAGG TAGACGCCGT GCTCTACATT GGCGGAAACG ATTCCATGGA CACCGCGGAT
AAGCTATCTC GATACTTTGC CCAGGTGGAA AGCGCTGTTC GTGTTGTTGG CGTGCCAAAA
ACCATCGACA ACGATCTAGA GGGCACGGAT CACACCCCCG GCTTTGGTAG CGCGGCGCGA
TTCGTTGCAT CCGTAACTGC CGAGCTCACC CGCGATGGCG GCGTCTACAA CACCAAAAAT
GTAACGTTTA TCGAGGCCAT GGGCCGCGAT GCAGGTTGGC TCACGGCAGC CGGTGCACTC
GCGCAAGATA TTTGCGGAAC TGCTCCAGAT TTTGTCCTTC TTCCCGAAGT TCCTCTTGAT
GTGAACGCAC TTCTTTCTGC TATTGAACAG CGTCTTCGCG AGAAAAACAA CGTAATTGTA
GTTGTCAGCG AAGGCGTCCA TCACGCGGAT GGTAGTTTCC TTTTTGATGC AAAGTCTGTT
GCGATTGACA CGTTTGGCCA CCTTGCGGCG CAGTCCGGAA CCGCGCAATA TTTGTCGCAG
CTGGTCAAAG ATCAGCTGGG TGTAAAGTCT CGCGGTATCG AACTCAATAC GCTGCAACGT
TGTGCATCAC ATGCTGCTAG CAAGGTTGAC TTGGACGAGG CAGAAGCGCT TGGCGCCGCA
GGAGTTAAGG CTGTTCTCCA AGGTAAAACA GGCGTCATGG TTGGCGTTCA CCGCATTCCA
AACGAACCAT ATACGACGGA AATACGTACT ACCCCTGTCG CCGACGTGGC CAACAAAGTA
AAGCTTGTAC CTCGAGAAAT GATCTCCGAA GATGGCTTCA ACGTTACTGA CACCGCTCTG
ACCTACCTGC GTCCTCTTGT CGCAGGCATA GAGGAACCAG TTTCCGTCGA CGGTCTTCCC
CGCTTTCTTG CGGAGTTGCC ATAA
|
|---|
| Protein sequence | MHSTSEHAIH TILVGQSGGP TTAINASLAG IIRAAHAQGL RVLGMRNGIQ GFLEGNVVDL
IEVLELEKPK LGALKQADTN LGEKNLQLLR KTPSSWLGSC RFKLPELEAN STSGASSEST
ANSKSAAVSP IYQQIDLQLK KYQVDAVLYI GGNDSMDTAD KLSRYFAQVE SAVRVVGVPK
TIDNDLEGTD HTPGFGSAAR FVASVTAELT RDGGVYNTKN VTFIEAMGRD AGWLTAAGAL
AQDICGTAPD FVLLPEVPLD VNALLSAIEQ RLREKNNVIV VVSEGVHHAD GSFLFDAKSV
AIDTFGHLAA QSGTAQYLSQ LVKDQLGVKS RGIELNTLQR CASHAASKVD LDEAEALGAA
GVKAVLQGKT GVMVGVHRIP NEPYTTEIRT TPVADVANKV KLVPREMISE DGFNVTDTAL
TYLRPLVAGI EEPVSVDGLP RFLAELP
|
|---|
| |