| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apar_0356 |
|---|
| Symbol | |
|---|
| ID | 8413205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Atopobium parvulum DSM 20469 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013203 |
|---|
| Strand | - |
|---|
| Start bp | 408660 |
|---|
| End bp | 410042 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 645021924 |
|---|
| Product | phosphofructokinase |
|---|
| Protein accession | YP_003179378 |
|---|
| Protein GI | 257784161 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0205] 6-phosphofructokinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.771355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAGA TTAGAAAAAT ACTTATCGGT CAATCAGGCG GCCCAACAGT AGCAATCAAT
TCTTCTCTTG CAGGAATTGT CGCGCGTGCG CACGAAGAAG GCATCGAAAT TTATGGCATG
CAAAACGGAA TTGAAGGATT TCTCAATGGT CGCTATACCA ATCTGACTAA CCTGTTCTTT
CCACAAGAAA ACCAGCAGAA TCGCAACGTT GACCAGCAGG AACATATCGT CAACCAGCAG
AAGCGCAGTG TTGACCAGCA GGAACACGGC GTGGACCAGC GCGGAGCTGA CCAACAGAAA
CACACCGTAG AACTTCTCGT CAAAACGCCT TCGAGCTTTC TGGGAAGCTG TCGATACAAG
CTTCCCGAAG TATCCGAAAA AACATCCTTT TACCAAGACA TTGAATGCCG CCTGACCTCC
CTTGAAATCG ACGGCATTCT CTACATTGGC GGCAACGATT CTATGGACAC CGTCAACAAG
CTTGCGGCTT ACTTTGCCCA GCACAACAAT GACATTTCCG TCATCGGCAT TCCCAAAACC
ATTGATAACG ACCTCGAAGG CACCGATCAC TCGCCGGGTT TTGGCAGCTC AGCGCGATAC
ATCGCTACCA TTGTCCGCGA ACTAGCCCGC GACTCCGAGG TTTACAACAA GCCAAACATC
ACTATCGTCG AAACTATGGG CCGCGATGCA GGCTGGTTGG GCGCGGCTTC GGCTCTTGCT
CGCGAGAAAA ACGAAGAAGC TCCAGACTTT ATTCTGCTCC CCGAGGTTAC TTACGACGAG
AAACGGCTAC TTCGCAAGAC GGCAGAGCTA TTTGAACACA AAAACAGCGT TGTAATTGTT
ATCAGTGAGG GAGTTAGAAG ACCCGATGGC TCAACGCTTC TGAACAAAAG TCACACAAAA
ATGGATGCCT TCGGCCATCT TGCAGATCAG TCCGGAAACG CCCTTTATCT GGCCGACCTT
TTCCAGAAGC ACTTTGACGC CAAGATTAGA GGCATCAACC TCAACTCACT GCAGCGCTGT
GCCATGCATT CGTCCAGCAA AACTGATCTG TCCGAGGCGT TTGAGCTGGG AAAAGCCGGA
GTAGACGCAC TCCTTGCCCA CAAAACTGGC TGCATGATTG GTCTGCAAAG GCTCAGCGAT
GTGCCATACC AAGCTGAAAT CCGCTGCATC CCTATCTCGG ATATTGCTAA TCGAGTGAAG
TCTGTACCTG CGGAAATGAT CTCTGACGAC GGCCTTTGGA TTACCGAGAA GGCCCTCGCG
TATCTTCGTC CTCTTGTCTC TAATGAAGAA CTAGCTTTTG ACGCAGATAC CAGGAGATTT
GTCAGCAGCA ACATCTTGCC CGACAATAAC GGTCTGCCAC CATTTATCCC AAAGCTAAGA
TAA
|
|---|
| Protein sequence | MRKIRKILIG QSGGPTVAIN SSLAGIVARA HEEGIEIYGM QNGIEGFLNG RYTNLTNLFF
PQENQQNRNV DQQEHIVNQQ KRSVDQQEHG VDQRGADQQK HTVELLVKTP SSFLGSCRYK
LPEVSEKTSF YQDIECRLTS LEIDGILYIG GNDSMDTVNK LAAYFAQHNN DISVIGIPKT
IDNDLEGTDH SPGFGSSARY IATIVRELAR DSEVYNKPNI TIVETMGRDA GWLGAASALA
REKNEEAPDF ILLPEVTYDE KRLLRKTAEL FEHKNSVVIV ISEGVRRPDG STLLNKSHTK
MDAFGHLADQ SGNALYLADL FQKHFDAKIR GINLNSLQRC AMHSSSKTDL SEAFELGKAG
VDALLAHKTG CMIGLQRLSD VPYQAEIRCI PISDIANRVK SVPAEMISDD GLWITEKALA
YLRPLVSNEE LAFDADTRRF VSSNILPDNN GLPPFIPKLR
|
|---|
| |