Gene Apar_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApar_0351 
Symbol 
ID8413200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAtopobium parvulum DSM 20469 
KingdomBacteria 
Replicon accessionNC_013203 
Strand
Start bp400106 
End bp403861 
Gene Length3756 bp 
Protein Length1251 aa 
Translation table11 
GC content55% 
IMG OID645021919 
Productphosphoribosylformylglycinamidine synthase 
Protein accessionYP_003179373 
Protein GI257784156 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 
TIGRFAM ID[TIGR01857] phosphoribosylformylglycinamidine synthase, clade II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCTGC GCGTCTACGT CCAAAGAAAA CCAGGTTTCG AGGGCGAGGC AAAAGCCCTG 
CTCAAAGAAG TGAAAGATCT TCTTGGTATT ACCGAGTTAC AACGCATTGA CCTGTTCAAC
CGCTACGATG TTGAAGGAAT TTCAGAGGAG CTCTTTGAGT CCTGCATCCC CACCGTTTTT
TCTGAGCCAC AGTCCGATTT TGCCAGCCGT ACCATGCCAG AATTTTCTTC TGAAGGTGCA
GCTGTTCATA CGTTTGCTGT TGAGTTTTTG CCTGGACAGT TTGACCAACG CGCAGACTCT
GCTGCTGAAT GCGTACAGCT CATCAGCCAG GGAGAACGCC CTCTTGTCCG CTCTGCTCGC
CTTTATGTGC TAACCGGAAA CCTTACTGAG GCAAACGTTG CCGCCATTAA GAACTACCTG
ATTAACCCCG TTGAGGCTCG CGAGGCATCC CTTGAGCTAC CCGAGACTCT CAAGATTTCC
ATTCCAGAAC CTGCTGACGT AGAGGTTCTT GAGGGTTTTA ACGCCCTTGA CCAAGACGGT
CTCAAAGAGT TCATTTCTTC TCACGGCCTT GCTATGGACC TGGCTGACCT CACCTTCTGC
CAACAGTACT TCACCGATGA GCAGCGAGAC CCAACCATCA CCGAGATTCG CGTCATTGAT
ACCTACTGGT CAGACCACTG CCGCCACACC ACTTTTAACA CCGGAATTAC CGGCGTACAG
ATTGATGATG ACCTGGTAAA GGCTGCGTTT GAAAAGTATC TCTCCATGCG TAAAGAGCTT
GGGCGAGAAG ATCGTGCCGT GTCTCTTTGG GATATGGCAA CTATTGGTGC AAAGTACCTT
CGCAAGAAGG GTATCCTCAC CAATCTTGAT GAGTCAGAAG AGATTAACGC TTGTACCGTA
AAGGTCAAAG TAGACGTTGA CGGCAAAGAC GAAGACTGGC TCTTCCTCTT CAAGAACGAG
ACTCATAACC ACCCAACCGA AATTGAACCT TTTGGTGGCG CAGCAACCTG CATCGGCGGT
GCTATCCGCG ACCCTCTTTC TGGCCGCAGC TACGTCTACC AGGCAATGCG CGTCACTGGT
GCTGCAGACC CAACCGTTCC TGTTTTCCAG ACACTTCCTG GAAAGCTTCC CCAGCGCACC
ATCGTACGCA CGGCAGCTGC AGGTTATTCC AGCTACGGCA ACCAGATTGG CCTTGCTACC
GGTCAAGTTT CTGAGCTCTA CCACCCAGGC TACGTTGCAA AACGCATGGA GATTGGTGCT
GTTGTAGGCG CAACTCCTCA AAGCCACGTC CGTCGCGAAC GCCCAGAAGA TGGCGACGTC
ATTGTTCTTC TCGGCGGCCG CACTGGTCGC GATGGCATTG GCGGCGCAAC TGGTTCTTCC
AAGGCTCACG ACGCAGGCTC TATTGAGCGC GACGGCGCCG AGGTTCAGAA GGGTAACGCC
CCTGTTGAGC GCAAGCTTCA GCGTCTCTTC CGCCGTGAAG ACGCTTGCAA GCTTATCAAG
CGCTGCAATG ACTTTGGTGC AGGTGGCGTT TCTGTTGCTA TTGGCGAGCT TGCCGACGGC
CTTGACGTTA ACCTGGACGC TGTTCCTAAA AAGTACGACG GTCTTGACGG CACTGAACTG
GCAATCTCCG AGTCTCAGGA GCGCATGGCT GTTGCGCTTG AGGCAAAAGA CGTTGAGCAG
TTCTGCGCAT ACGCCCGCGA AGAAAATCTC GAGGCAACCA TTGTGGCAAC AGTCACTGAA
GACCCTCGTT TAGTCATGCG TTGGCGCGGT CAGAAGATTG TCAACATCAG CCGCGCATTT
CTCGCCTCAA ACGGCGCGCC TAAATCAATC ACCGTACGCC TGGCCAAACC TCTTGTCTAC
CAGCGCACCT GGGCAGGCTC AACCCTTGGC GAGAAACTCC ACTCGCTGGT ACGCGATTTA
AACGTTGCCT CTAATAAGGG CCTCTCCGAG CGCTTTGACT CCACTATTGG CGCAGGTACT
GTCCTCATGC CCTTTGGTGG TGCTCGCCAG CTAACCCCTG CCCTTTCTAT GGTGGCTAAG
CTCCCTGTTA TGGGCCAAAC CAGCACCGTC TCGGGCATGG CCTGGGGCTT TAACCCCTAC
CTCATGGAGG CTGACCAGTT CCGCGGTGCA TACCTCTCTG TTGTCGAGTC CGTCTCCAAG
TTGGTTGCTA CCGGCTTTAA GTACCAGGAC CTCTACCTCA CTTTCCAGGA GTACTTCGAG
AAACTTGGCC AGAATCCAAA CCGTTGGGGC AAACCTACCT CAGCACTGCT CGGCGCACTG
ATGGCGCAGG TCAACCTTGG TCTTGCGGCT GTTGGTGGTA AGGATTCCAT GTCCGGTACC
TTTGAGGACT TGGACGTTCC ACCAACACTG GTTTCGTTTG CCACCGGCCT TACCAAAGTA
GACAAGATTG TCTCCAACGA GTTCAAGGGC GCAGGTCATA GGCTTATCTC TATTGTTCCG
TCCTACGACG AGAGCGGTCT TCTCCCCAAC AACGAGTCCC TGCTTACCGC ATACAAGCTG
GTCAGCACTC TTGTCCAGTC CAAGAGTGCG CTTGCCATCA CCACACCAGG TTACGGCGGC
GTAGCCGAGG CTCTCTTCAA GAGCTGTCTG GGCAACAAGC TGGGCGTTGA GCTTGTGCCA
GAGATTTCTG CCAACGCGCT CTTCTCGCCA ACTTACGGTG CCTTCATTGT TGAGCTGGCA
GACGGCGTAT CCGTTGACGA CGTCGACGGC GTGTGCGTAG CTCCGCTAGG CGCCACCACG
TCCGAGTACA CCTTCAGCGC ATGTGGCGAG AAAATCGATC TCTCCGAGCT TCAGGAAGCG
TGGGAGCGCC CACTTGAGGA AGTCTTCCCT TACCGCGGAG GCTCCGACGA GGCTGTGGAG
AAAATCAGCT TCGATGGTGC ATCCACACGA CACTCCTACG CTGGTCCAAC CCTTATCGCA
CCTGCTCGCC CACGCGTCAT CATCCCCGTA TTCCCAGGTA ACAACTGCGA GTACGATGTT
GCGCGTGCCT TTGAGCGTGC GGGCGCTGAC CCAACCACGC TGGTCATCAA CAACCTGACA
CCTCAAGACA TTGTTGAGTC CGCAAATGCG CTGGCAGAGT CTATCAAGAA GAGCCAGATT
GTCATGATTC CAGGCGGCTT CTCCGGCGGA GACGAGCCAG ACGGATCTGC TAAGTTCATC
TGCGCTCTCT TCCGTGCTCC TCAGGTTACC GAGGCTGTTT GCGACCTTCT ACAGCAGCGC
GATGGACTTA TGCTGGGCAT CTGCAATGGC TTCCAAGCAC TCATCAAGCT GGGCCTTGTT
CCTTACGGCA ACATTCGTCC TATGGACGAC ACCTGTCCAA CGCTAACGTT CAACACCATC
GGCCGTCACC AGAGCCAGCT TGTTCACACC AGCGTTGCAT CAACGATGTC CCCATGGCTC
TCCAAATGCG CGCTTGGCGA CATTCACACC ATTGCAATTA GCCACGGAGA AGGCCGCTTT
GTTGCCTCCG ACGAGCTGCT TGAGACGCTC AAGGCAAACG GCCAGATTGC AACGCAGTAC
GTTGACGCAA CAGGTACTCC AAGCATGGAC TTCTCCGTTA ACCCTAACGG CTCCGTCCTG
GCTATCGAGG GCATCACCAG CCCCGACGGT CGTATCTTGG GCAAGATGGG TCACACGGAG
CGCTCTGGCG CAGGCCTCTA CAAGAACATC CCCGAGCTCA CCCCTGGCGA CCAGTTCCAG
CCTCTCATTG AGGGCGGCGT CGAGTACTTC AAGTAA
 
Protein sequence
MVLRVYVQRK PGFEGEAKAL LKEVKDLLGI TELQRIDLFN RYDVEGISEE LFESCIPTVF 
SEPQSDFASR TMPEFSSEGA AVHTFAVEFL PGQFDQRADS AAECVQLISQ GERPLVRSAR
LYVLTGNLTE ANVAAIKNYL INPVEAREAS LELPETLKIS IPEPADVEVL EGFNALDQDG
LKEFISSHGL AMDLADLTFC QQYFTDEQRD PTITEIRVID TYWSDHCRHT TFNTGITGVQ
IDDDLVKAAF EKYLSMRKEL GREDRAVSLW DMATIGAKYL RKKGILTNLD ESEEINACTV
KVKVDVDGKD EDWLFLFKNE THNHPTEIEP FGGAATCIGG AIRDPLSGRS YVYQAMRVTG
AADPTVPVFQ TLPGKLPQRT IVRTAAAGYS SYGNQIGLAT GQVSELYHPG YVAKRMEIGA
VVGATPQSHV RRERPEDGDV IVLLGGRTGR DGIGGATGSS KAHDAGSIER DGAEVQKGNA
PVERKLQRLF RREDACKLIK RCNDFGAGGV SVAIGELADG LDVNLDAVPK KYDGLDGTEL
AISESQERMA VALEAKDVEQ FCAYAREENL EATIVATVTE DPRLVMRWRG QKIVNISRAF
LASNGAPKSI TVRLAKPLVY QRTWAGSTLG EKLHSLVRDL NVASNKGLSE RFDSTIGAGT
VLMPFGGARQ LTPALSMVAK LPVMGQTSTV SGMAWGFNPY LMEADQFRGA YLSVVESVSK
LVATGFKYQD LYLTFQEYFE KLGQNPNRWG KPTSALLGAL MAQVNLGLAA VGGKDSMSGT
FEDLDVPPTL VSFATGLTKV DKIVSNEFKG AGHRLISIVP SYDESGLLPN NESLLTAYKL
VSTLVQSKSA LAITTPGYGG VAEALFKSCL GNKLGVELVP EISANALFSP TYGAFIVELA
DGVSVDDVDG VCVAPLGATT SEYTFSACGE KIDLSELQEA WERPLEEVFP YRGGSDEAVE
KISFDGASTR HSYAGPTLIA PARPRVIIPV FPGNNCEYDV ARAFERAGAD PTTLVINNLT
PQDIVESANA LAESIKKSQI VMIPGGFSGG DEPDGSAKFI CALFRAPQVT EAVCDLLQQR
DGLMLGICNG FQALIKLGLV PYGNIRPMDD TCPTLTFNTI GRHQSQLVHT SVASTMSPWL
SKCALGDIHT IAISHGEGRF VASDELLETL KANGQIATQY VDATGTPSMD FSVNPNGSVL
AIEGITSPDG RILGKMGHTE RSGAGLYKNI PELTPGDQFQ PLIEGGVEYF K